RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ASNSP08243 561 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 TIMM10P62072 90 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 IRX3P78415 501 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 PDE4CQ08493 712 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 SPTY2D1Q68D10 685 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 LBX2Q6XYB7 198 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 SLC39A5Q6ZMH5 540 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 DZIP1Q86YF9 867 aaKnown RBP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 USP38Q8NB14 1042 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 GTF3C2Q8WUA4 911 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 TRIM43Q96BQ3 446 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 EDC3Q96F86 508 aaKnown RBP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 POM121Q96HA1 1249 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 C12orf42Q96LP6 360 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 AS3MTQ9HBK9 375 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 ZNF358Q9NW07 568 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 PI4KBQ9UBF8 816 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 ABCF2Q9UG63 623 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 RAPGEFL1Q9UHV5 662 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-207ENST00000518716 PTPRCP08575 1304 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 SLC15A5A6NIM6 579 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 USP17L10C9JJH3 530 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 MSCO60682 206 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 CYBAP13498 195 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 FOSL2P15408 326 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 ITGB8P26012 769 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 ABL2P42684 1182 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 EPHB4P54760 987 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 PDE3AQ14432 1141 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 GRB14Q14449 540 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 NPLOC4Q8TAT6 608 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 SSH1Q8WYL5 1049 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 BADQ92934 168 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 SIL1Q9H173 461 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 PDLIM7Q9NR12 457 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 TMOD4Q9NZQ9 345 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 HMG20BQ9P0W2 317 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 PA2G4Q9UQ80 394 aaKnown RBP7.41□□□□□ -1.22
PABPC1-207ENST00000518716 RABGAP1Q9Y3P9 1069 aa7.41□□□□□ -1.22
PABPC1-207ENST00000518716 SERTM1A2A2V5 107 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 APBB1O00213 710 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 DEAF1O75398 565 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-207ENST00000518716 TGFB1P01137 390 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 PLAURQ03405 335 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 MFSD14CQ5VZR4 134 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 PI16Q6UXB8 463 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 FOXP4Q8IVH2 680 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-207ENST00000518716 SH3RF3Q8TEJ3 882 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-207ENST00000518716 DHX36Q9H2U1 1008 aaKnown RBP7.4□□□□□ -1.22
PABPC1-207ENST00000518716 GDPD2Q9HCC8 539 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 PRM3Q9NNZ6 103 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 BTBD7Q9P203 1132 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 ZBTB21Q9ULJ3 1066 aa7.4□□□□□ -1.22
PABPC1-207ENST00000518716 SMCHD1A6NHR9 2005 aa7.4□□□□□ -1.23
PABPC1-207ENST00000518716 A0A1B0GUL7 405 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 KIAA0355O15063 1070 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 LDHCP07864 332 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 ARID4AP29374 1257 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-207ENST00000518716 CYP2C19P33261 490 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 PLA2G5P39877 138 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 GSTO1P78417 241 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 TRIM60Q495X7 471 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 GJC2Q5T442 439 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-207ENST00000518716 OLFML2BQ68BL8 750 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 CATSPERGQ6ZRH7 1159 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 TEX11Q8IYF3 940 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 SPATA5Q8NB90 893 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 ARRDC4Q8NCT1 418 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 SUSD3Q96L08 255 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 MUC6Q6W4X9 2439 aa7.39□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L15C9J2P7 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L13C9JLJ4 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L11C9JVI0 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L18D6R9N7 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L22D6RA61 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L17D6RBQ6 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L19D6RCP7 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L20D6RJB6 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 SEPT4O43236 478 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 ALX3O95076 343 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 CENPBP07199 599 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-207ENST00000518716 MCAMP43121 646 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 ATP2B2Q01814 1243 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 TLE2Q04725 743 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 VAC14Q08AM6 782 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 USP17L24Q0WX57 530 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 TFCP2Q12800 502 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 MVPQ14764 893 aaKnown RBP7.38□□□□□ -1.23
PABPC1-207ENST00000518716 LRRC41Q15345 812 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 RASIP1Q5U651 963 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 TATDN1Q6P1N9 297 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 ADGRA1Q86SQ6 560 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 PAGR1Q9BTK6 254 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
PABPC1-207ENST00000518716 COG6Q9Y2V7 657 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms