RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PKN1Q16512 942 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 EGFLAMQ63HQ2 1017 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 BICRALQ6AI39 1079 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 PAQR3Q6TCH7 311 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 TEX2Q8IWB9 1127 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 USP33Q8TEY7 942 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 NINJ1Q92982 152 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 MAGEB10Q96LZ2 347 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-207ENST00000518569 CLUHP3Q96NS8 147 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 TRIM39Q9HCM9 518 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 INTS7Q9NVH2 962 aaKnown RBP5.4□□□□□ -1.54
VPS13B-207ENST00000518569 CLDND1Q9NY35 253 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 FBXL7Q9UJT9 491 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 COA3Q9Y2R0 106 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-207ENST00000518569 FAM47E-STBD1D6RA91 191 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 NPTXRO95502 500 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 CRTAMO95727 393 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 SOD2P04179 222 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 GRK2P25098 689 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 TACR1P25103 407 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 GRK3P35626 688 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 SLC6A11P48066 632 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 GALK1P51570 392 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 YBX1P67809 324 aaKnown RBP5.39□□□□□ -1.55
VPS13B-207ENST00000518569 GUCY1A3Q02108 690 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 ZNF124Q15973 351 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 TKFCQ3LXA3 575 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 BRAPQ7Z569 592 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 MTDHQ86UE4 582 aaKnown RBP5.39□□□□□ -1.55
VPS13B-207ENST00000518569 SCLYQ96I15 445 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 TMX1Q9H3N1 280 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 ZNF552Q9H707 407 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-207ENST00000518569 BTG4Q9NY30 223 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 NUDT5Q9UKK9 219 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 CD2APQ9Y5K6 639 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 SHROOM4Q9ULL8 1493 aa5.39□□□□□ -1.55
VPS13B-207ENST00000518569 ASLP04424 464 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 FPR2P25090 351 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 CANXP27824 592 aaKnown RBP5.38□□□□□ -1.55
VPS13B-207ENST00000518569 PDE6BP35913 854 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 MAPKAPK2P49137 400 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 CHRNA2Q15822 529 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 DALRD3Q5D0E6 543 aaKnown RBP5.38□□□□□ -1.55
VPS13B-207ENST00000518569 ADGRF1Q5T601 910 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 OLFML2BQ68BL8 750 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 MPZL3Q6UWV2 235 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 DCP2Q8IU60 420 aaKnown RBP5.38□□□□□ -1.55
VPS13B-207ENST00000518569 PANK1Q8TE04 598 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 PEX11GQ96HA9 241 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 SLKQ9H2G2 1235 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-207ENST00000518569 EPB41L1Q9H4G0 881 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 KLHL14Q9P2G3 628 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 MAGEC2Q9UBF1 373 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-207ENST00000518569 FBLN5Q9UBX5 448 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 PCDHA9Q9Y5H5 950 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 PCDHA8Q9Y5H6 950 aa5.38□□□□□ -1.55
VPS13B-207ENST00000518569 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-207ENST00000518569 TCRBV16S1A1N1A0A5B0 115 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 B4E1Z4 1266 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 GSTA4O15217 222 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 PEX10O60683 326 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 DGKIO75912 1065 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 FARP2O94887 1054 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-207ENST00000518569 ZBTB7AO95365 584 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 NTRK1P04629 796 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 RAB3GAP1Q15042 981 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 EMC4Q5J8M3 183 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 CYP4F22Q6NT55 531 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 FGD2Q7Z6J4 655 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 NIM1KQ8IY84 436 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 PCDH19Q8TAB3 1148 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 SEC14L1Q92503 715 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 FBXW5Q969U6 566 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 LIN37Q96GY3 246 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-207ENST00000518569 SLC38A3Q99624 504 aa5.37□□□□□ -1.55
VPS13B-207ENST00000518569 MAFKO60675 156 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 DNAJC8O75937 253 aaPredicted RBP5.36□□□□□ -1.55
VPS13B-207ENST00000518569 RASGRP1O95267 797 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 IGFALSP35858 605 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 GYS2P54840 703 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 SPIRE1Q08AE8 756 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 SLC9A5Q14940 896 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 FAM47CQ5HY64 1035 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 HABP4Q5JVS0 413 aaKnown RBP5.36□□□□□ -1.55
VPS13B-207ENST00000518569 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 RPTNQ6XPR3 784 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 C16orf59Q7L2K0 433 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 OTOP3Q7RTS5 596 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS13B-207ENST00000518569 MFSD3Q96ES6 412 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 TSPAN17Q96FV3 270 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 AP5M1Q9H0R1 490 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 IPPKQ9H8X2 491 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 SLC6A20Q9NP91 592 aa5.36□□□□□ -1.55
VPS13B-207ENST00000518569 PPARGC1AQ9UBK2 798 aaKnown RBP5.36□□□□□ -1.55
VPS13B-207ENST00000518569 LOC105371045A0A1W2PR82 267 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 ZC3H12DA2A288 527 aaKnown RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 NUDT19A8MXV4 375 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms