RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 SUPT20HL2P0C7V6 817 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 CALM1P0DP23 149 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 CALM2P0DP24 149 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 CALM3P0DP25 149 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 CYP2C9P11712 490 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 FGD1P98174 961 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 PSRC1Q6PGN9 363 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-205ENST00000518060 DHX37Q8IY37 1157 aaKnown RBP12.22□□□□□ -0.45
SPIDR-205ENST00000518060 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 TCEANC2Q96MN5 208 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
SPIDR-205ENST00000518060 MTMR10Q9NXD2 777 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 SMAD3P84022 425 aaKnown RBP12.21□□□□□ -0.45
SPIDR-205ENST00000518060 COL9A3Q14050 684 aaPredicted RBP12.21□□□□□ -0.45
SPIDR-205ENST00000518060 PGM5Q15124 567 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 CCDC62Q6P9F0 684 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 CCDC82Q8N4S0 544 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 SCLYQ96I15 445 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 NEK1Q96PY6 1258 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 ALG1Q9BT22 464 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 MTA3Q9BTC8 594 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 SPZ1Q9BXG8 430 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.45
SPIDR-205ENST00000518060 IL23AQ9NPF7 189 aa12.21□□□□□ -0.45
SPIDR-205ENST00000518060 MAP3K20Q9NYL2 800 aaKnown RBP12.21□□□□□ -0.45
SPIDR-205ENST00000518060 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
SPIDR-205ENST00000518060 LIFRP42702 1097 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 LAMC2Q13753 1193 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 KRT32Q14532 448 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 DGKDQ16760 1214 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 TMEM240Q5SV17 173 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 NFRKBQ6P4R8 1299 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 ZNF365Q70YC5 407 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 HEATR3Q7Z4Q2 680 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 SRBD1Q8N5C6 995 aaKnown RBP12.2□□□□□ -0.46
SPIDR-205ENST00000518060 SAMD3Q8N6K7 520 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 RETREG2Q8NC44 543 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 SPATA33Q96N06 139 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 WNT8AQ9H1J5 351 aa12.2□□□□□ -0.46
SPIDR-205ENST00000518060 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
SPIDR-205ENST00000518060 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-205ENST00000518060 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-205ENST00000518060 GGPS1O95749 300 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 FGBP02675 491 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 UBA1P22314 1058 aaKnown RBP12.19□□□□□ -0.46
SPIDR-205ENST00000518060 GHRHRQ02643 423 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 PTGISQ16647 500 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 GNPTABQ3T906 1256 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 FAM109BQ6ICB4 259 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-205ENST00000518060 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 USP17L6PQ6QN14 398 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 OTOP2Q7RTS6 562 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 FANCBQ8NB91 859 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 PPTC7Q8NI37 304 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 GUCD1Q96NT3 240 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 KATNAL1Q9BW62 490 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 MLXIPQ9HAP2 919 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 STXBP5LQ9Y2K9 1186 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 MYH6P13533 1939 aa12.19□□□□□ -0.46
SPIDR-205ENST00000518060 KLF18A0A0U1RQI7 1052 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 GRXCR1A8MXD5 290 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 NOP56O00567 594 aaKnown RBP12.18□□□□□ -0.46
SPIDR-205ENST00000518060 ZBTB43O43298 467 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 DNAJB2P25686 324 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 PSEN2P49810 448 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 SP4Q02446 784 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 PTPN11Q06124 597 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-205ENST00000518060 MFSD10Q14728 455 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 RTN1Q16799 776 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 C16orf59Q7L2K0 433 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 DHX32Q7L7V1 743 aaKnown RBP12.18□□□□□ -0.46
SPIDR-205ENST00000518060 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
SPIDR-205ENST00000518060 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 GPKOWQ92917 476 aaPredicted RBP eCLIP12.18□□□□□ -0.46
SPIDR-205ENST00000518060 TIFAQ96CG3 184 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 FTOQ9C0B1 505 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPIDR-205ENST00000518060 SEMA6BQ9H3T3 888 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 PSTPIP2Q9H939 334 aa12.18□□□□□ -0.46
SPIDR-205ENST00000518060 RGS20O76081 388 aa12.17□□□□□ -0.46
SPIDR-205ENST00000518060 SMARCA1P28370 1054 aa12.17□□□□□ -0.46
SPIDR-205ENST00000518060 BFSP2Q13515 415 aa12.17□□□□□ -0.46
SPIDR-205ENST00000518060 UBE2SQ16763 222 aa12.17□□□□□ -0.46
SPIDR-205ENST00000518060 KIAA0753Q2KHM9 967 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms