RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 ITGA7Q13683 1181 aa28.41■■■□□ 2.14
PVT1-204ENST00000517525 RTN1Q16799 776 aa28.41■■■□□ 2.14
PVT1-204ENST00000517525 LRIT3Q3SXY7 679 aa28.41■■■□□ 2.14
PVT1-204ENST00000517525 RAB11FIP4Q86YS3 637 aa28.41■■■□□ 2.14
PVT1-204ENST00000517525 FAM217BQ9NTX9 383 aaPredicted RBP28.41■■■□□ 2.14
PVT1-204ENST00000517525 TMEM39AQ9NV64 488 aa28.41■■■□□ 2.14
PVT1-204ENST00000517525 KLF18A0A0U1RQI7 1052 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 MEIS2O14770 477 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 STAM2O75886 525 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 TGFB3P10600 412 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 RPS6KB1P23443 525 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 CCND2P30279 289 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 ARHGAP1Q07960 439 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 COPS5Q92905 334 aa28.4■■■□□ 2.14
PVT1-204ENST00000517525 NID2Q14112 1375 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 EVCP57679 992 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 XRRA1Q6P2D8 792 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 FCHSD1Q86WN1 690 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 IL31RAQ8NI17 732 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 BADQ92934 168 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 CUL5Q93034 780 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 MTG1Q9BT17 334 aaPredicted RBP28.39■■■□□ 2.14
PVT1-204ENST00000517525 TM6SF1Q9BZW5 370 aa28.39■■■□□ 2.14
PVT1-204ENST00000517525 CNTNAP5Q8WYK1 1306 aa28.39■■■□□ 2.13
PVT1-204ENST00000517525 LTBP2Q14767 1821 aa28.39■■■□□ 2.13
PVT1-204ENST00000517525 TLR3O15455 904 aaKnown RBP28.38■■■□□ 2.13
PVT1-204ENST00000517525 CPA1P15085 419 aa28.38■■■□□ 2.13
PVT1-204ENST00000517525 ITGB8P26012 769 aa28.38■■■□□ 2.13
PVT1-204ENST00000517525 LY6KQ17RY6 165 aa28.38■■■□□ 2.13
PVT1-204ENST00000517525 Q6ZUG5 572 aa28.38■■■□□ 2.13
PVT1-204ENST00000517525 PSTPIP2Q9H939 334 aa28.38■■■□□ 2.13
PVT1-204ENST00000517525 ZSWIM6Q9HCJ5 1215 aa28.38■■■□□ 2.13
PVT1-204ENST00000517525 CCDC196A0A1B0GTZ2 297 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 GOLGA8AA7E2F4 631 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 GOLGA8BA8MQT2 603 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 hCG_1984214I3L0E3 225 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 TIMP1P01033 207 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 MYCLP12524 364 aaPredicted RBP28.37■■■□□ 2.13
PVT1-204ENST00000517525 RAG1P15918 1043 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 FGD1P98174 961 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 ZNF713Q8N859 430 aaPredicted RBP28.37■■■□□ 2.13
PVT1-204ENST00000517525 MRVI1Q9Y6F6 885 aa28.37■■■□□ 2.13
PVT1-204ENST00000517525 KIAA1217Q5T5P2 1943 aa28.36■■■□□ 2.13
PVT1-204ENST00000517525 ICAM3P32942 547 aa28.36■■■□□ 2.13
PVT1-204ENST00000517525 LAMC2Q13753 1193 aa28.36■■■□□ 2.13
PVT1-204ENST00000517525 USP17L6PQ6QN14 398 aa28.36■■■□□ 2.13
PVT1-204ENST00000517525 CCDC82Q8N4S0 544 aa28.36■■■□□ 2.13
PVT1-204ENST00000517525 SMARCC2Q8TAQ2 1214 aa28.36■■■□□ 2.13
PVT1-204ENST00000517525 INPP4AQ96PE3 977 aaPredicted RBP28.36■■■□□ 2.13
PVT1-204ENST00000517525 MYL3P08590 195 aa28.35■■■□□ 2.13
PVT1-204ENST00000517525 HOXD8P13378 290 aaPredicted RBP28.35■■■□□ 2.13
PVT1-204ENST00000517525 CASTP20810 708 aaKnown RBP28.35■■■□□ 2.13
PVT1-204ENST00000517525 CDC27P30260 824 aa28.35■■■□□ 2.13
PVT1-204ENST00000517525 GPR153Q6NV75 609 aa28.35■■■□□ 2.13
PVT1-204ENST00000517525 PPP1R18Q6NYC8 613 aa28.35■■■□□ 2.13
PVT1-204ENST00000517525 AFG1LQ8WV93 481 aa28.35■■■□□ 2.13
PVT1-204ENST00000517525 BRF1Q92994 677 aa28.35■■■□□ 2.13
PVT1-204ENST00000517525 MMP3P08254 477 aa28.34■■■□□ 2.13
PVT1-204ENST00000517525 PSMC6P62333 389 aa28.34■■■□□ 2.13
PVT1-204ENST00000517525 MRPS9P82933 396 aaKnown RBP28.34■■■□□ 2.13
PVT1-204ENST00000517525 PTPN11Q06124 597 aaPredicted RBP28.34■■■□□ 2.13
PVT1-204ENST00000517525 APOBRQ0VD83 1088 aa28.34■■■□□ 2.13
PVT1-204ENST00000517525 PCNX4Q63HM2 1172 aa28.34■■■□□ 2.13
PVT1-204ENST00000517525 NFRKBQ6P4R8 1299 aa28.34■■■□□ 2.13
PVT1-204ENST00000517525 RUFY3Q7L099 469 aa28.34■■■□□ 2.13
PVT1-204ENST00000517525 V9GY48 417 aaPredicted RBP28.34■■■□□ 2.13
PVT1-204ENST00000517525 SCN10AQ9Y5Y9 1956 aa28.33■■■□□ 2.13
PVT1-204ENST00000517525 hCG_1642624A0A1W2PR95 340 aa28.33■■■□□ 2.13
PVT1-204ENST00000517525 METAP2P50579 478 aaKnown RBP eCLIP28.33■■■□□ 2.13
PVT1-204ENST00000517525 GNPTABQ3T906 1256 aa28.33■■■□□ 2.13
PVT1-204ENST00000517525 MYSM1Q5VVJ2 828 aa28.33■■■□□ 2.13
PVT1-204ENST00000517525 MFSD5Q6N075 450 aa28.33■■■□□ 2.13
PVT1-204ENST00000517525 PPTC7Q8NI37 304 aa28.33■■■□□ 2.13
PVT1-204ENST00000517525 ALDH8A1Q9H2A2 487 aaPredicted RBP28.33■■■□□ 2.13
PVT1-204ENST00000517525 CELF3Q5SZQ8 465 aaKnown RBP28.32■■■□□ 2.12
PVT1-204ENST00000517525 WWC2Q6AWC2 1192 aa28.32■■■□□ 2.12
PVT1-204ENST00000517525 HEATR3Q7Z4Q2 680 aa28.32■■■□□ 2.12
PVT1-204ENST00000517525 SPATA31C2B4DYI2 1134 aa28.31■■■□□ 2.12
PVT1-204ENST00000517525 SOX1O00570 391 aaPredicted RBP28.31■■■□□ 2.12
PVT1-204ENST00000517525 SUPT20HL2P0C7V6 817 aa28.31■■■□□ 2.12
PVT1-204ENST00000517525 ADD1P35611 737 aaKnown RBP28.31■■■□□ 2.12
PVT1-204ENST00000517525 FPGSQ05932 587 aa28.31■■■□□ 2.12
PVT1-204ENST00000517525 DGKDQ16760 1214 aa28.31■■■□□ 2.12
PVT1-204ENST00000517525 DHX37Q8IY37 1157 aaKnown RBP28.31■■■□□ 2.12
PVT1-204ENST00000517525 GLT8D2Q9H1C3 349 aa28.31■■■□□ 2.12
PVT1-204ENST00000517525 BARHL2Q9NY43 387 aa28.31■■■□□ 2.12
PVT1-204ENST00000517525 B4GALT4O60513 344 aa28.3■■■□□ 2.12
PVT1-204ENST00000517525 EIF5BO60841 1220 aaKnown RBP28.3■■■□□ 2.12
PVT1-204ENST00000517525 PPFIA4O75335 1185 aa28.3■■■□□ 2.12
PVT1-204ENST00000517525 SP2Q02086 613 aa28.3■■■□□ 2.12
PVT1-204ENST00000517525 NBPF20Q3BBV1 942 aa28.3■■■□□ 2.12
PVT1-204ENST00000517525 SESTD1Q86VW0 696 aa28.3■■■□□ 2.12
PVT1-204ENST00000517525 GPKOWQ92917 476 aaPredicted RBP eCLIP28.3■■■□□ 2.12
PVT1-204ENST00000517525 RIC8AQ9NPQ8 531 aa28.3■■■□□ 2.12
PVT1-204ENST00000517525 CYP46A1Q9Y6A2 500 aa28.3■■■□□ 2.12
PVT1-204ENST00000517525 FIBPO43427 364 aa28.29■■■□□ 2.12
PVT1-204ENST00000517525 UBA1P22314 1058 aaKnown RBP28.29■■■□□ 2.12
PVT1-204ENST00000517525 TYW1BQ6NUM6 668 aa28.29■■■□□ 2.12
PVT1-204ENST00000517525 KAT2BQ92831 832 aa28.29■■■□□ 2.12
PVT1-204ENST00000517525 SENP7Q9BQF6 1050 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms