RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 PCDH19Q8TAB3 1148 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DIS3LQ8TF46 1054 aaKnown RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPP1R13LQ8WUF5 828 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CYB5D2Q8WUJ1 264 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NUDT8Q8WV74 236 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCT6BQ92526 530 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KIAA1191Q96A73 305 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PGBD4Q96DM1 585 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ERP27Q96DN0 273 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KLHDC7BQ96G42 594 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TMEM169Q96HH4 297 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RIPOR3Q96MK2 946 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZFP42Q96MM3 310 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC2A13Q96QE2 648 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 BHMT2Q9H2M3 363 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GPRC5CQ9NQ84 441 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PDLIM7Q9NR12 457 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCM2LQ9NUG4 571 aaPredicted RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RTEL1Q9NZ71 1219 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CLIC5Q9NZA1 410 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPARGC1AQ9UBK2 798 aaKnown RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SERPINB13Q9UIV8 391 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPP1R9AQ9ULJ8 1098 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GPR52Q9Y2T5 361 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC4A7Q9Y6M7 1214 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SETD1BQ9UPS6 1966 aaKnown RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LOC100289279A0A1B0GTE1 492 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CCDC66A2RUB6 948 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 MEIS1O00470 390 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 C2CD2LO14523 706 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TMPRSS2O15393 492 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CPP00450 1065 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SCG5P05408 212 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PYGLP06737 847 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 NEFMP07197 916 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 THBDP07204 575 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 YBX3P16989 372 aaKnown RBP eCLIP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 VCAM1P19320 739 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SLC9A1P19634 815 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ABCB4P21439 1286 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 C5AR1P21730 350 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ADH7P40394 386 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 CASP2P42575 452 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 BAG6P46379 1132 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ARL4DP49703 201 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TERF1P54274 439 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GPR85P60893 370 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ERVK-24P63145 666 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PIP4K2BP78356 416 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 KRT85P78386 507 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 POU5F1Q01860 360 aaKnown RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 OCRLQ01968 901 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 DDX10Q13206 875 aaKnown RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TERF2Q15554 542 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PCSK7Q16549 785 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ATAT1Q5SQI0 421 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 HYIQ5T013 277 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 DUSP27Q5VZP5 1158 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PPP4R3AQ6IN85 833 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FSTL4Q6MZW2 842 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 MZT2AQ6P582 158 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TRIM67Q6ZTA4 783 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 OVCH1Q7RTY7 1134 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PTRH1Q86Y79 214 aaKnown RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 DRC7Q8IY82 874 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ZNF507Q8TCN5 953 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 LMBR1Q8WVP7 490 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 HPS3Q969F9 1004 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ZNF837Q96EG3 531 aaPredicted RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 KREMEN1Q96MU8 473 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 B3GNT5Q9BYG0 378 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 WDR12Q9GZL7 423 aaKnown RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PRDM14Q9GZV8 571 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 VPS11Q9H270 941 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GFOD1Q9NXC2 390 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 GPRC5BQ9NZH0 403 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 POLG2Q9UHN1 485 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FBXO2Q9UK22 296 aaPredicted RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ATXN7L1Q9ULK2 861 aaPredicted RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ZNF652Q9Y2D9 606 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RABGAP1Q9Y3P9 1069 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 NOC2LQ9Y3T9 749 aaKnown RBP3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 PCDHA11Q9Y5I1 949 aa3.27□□□□□ -1.89
SCARNA11.3-201ENST00000517276 SLC35F4A4IF30 521 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 A6NCN8 305 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RASA4BC9J798 803 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 H0Y8X5 98 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 H7C1W4 665 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 J3KRW8 73 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 M0R3H8 397 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 STXBP3O00186 592 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 KCNK3O14649 394 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FSCN2O14926 492 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 KPNA5O15131 536 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 FANCGO15287 622 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 RASA4O43374 803 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 NCK2O43639 380 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 TLR5O60602 858 aa3.26□□□□□ -1.89
SCARNA11.3-201ENST00000517276 ADAM11O75078 769 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms