RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 TRIM75PA6NK02 468 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 A6NNZ2 444 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SHISA8B8ZZ34 492 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 F5H423 210 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 TPP1O14773 563 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 DDX3YO15523 660 aaKnown RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 OIP5O43482 229 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 TGM5O43548 720 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 AP1G1O43747 822 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 ADAM11O75078 769 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 H2AFYO75367 372 aaKnown RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 NEFMP07197 916 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 HSP90AA1P07900 732 aaKnown RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 FAM163BP0C2L3 166 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SRGAP2CP0DJJ0 459 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SRGNP10124 158 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SLC5A1P13866 664 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 RHCEP18577 417 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 ITIH2P19823 946 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 ADH6P28332 368 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 IREB2P48200 963 aaKnown RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 ALDH5A1P51649 535 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SCAND1P57086 179 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SNRPNP63162 240 aaKnown RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 RNF4P78317 190 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 RHDQ02161 417 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SCRN1Q12765 414 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SIM2Q14190 667 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 TTLL4Q14679 1199 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 DDB1Q16531 1140 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 DPY19L1Q2PZI1 675 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 NBPF9Q3BBW0 867 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 EXOSC6Q5RKV6 272 aaKnown RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 BROXQ5VW32 411 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 RSPO2Q6UXX9 243 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 C1orf229Q6ZS94 237 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 CATIPQ7Z7H3 387 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 KLHL23Q8NBE8 558 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 DNAJB8Q8NHS0 232 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 PCDH19Q8TAB3 1148 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 TEKT5Q96M29 485 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 ZDHHC15Q96MV8 337 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 PAGR1Q9BTK6 254 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 PHF20Q9BVI0 1012 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 SELENOOQ9BVL4 669 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 CELF4Q9BZC1 486 aaKnown RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 FOXQ1Q9C009 403 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 INO80BQ9C086 356 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 PRDM14Q9GZV8 571 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 RNF38Q9H0F5 515 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 JPH1Q9HDC5 661 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 OXSMQ9NWU1 459 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 C9orf78Q9NZ63 289 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 H2AFY2Q9P0M6 372 aaPredicted RBP3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 FNIP2Q9P278 1114 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 NRBP1Q9UHY1 535 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 CEP131Q9UPN4 1083 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 INVSQ9Y283 1065 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 ZNF652Q9Y2D9 606 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 NPFFR2Q9Y5X5 522 aa3.17□□□□□ -1.9
SCARNA3-201ENST00000517097 ELOA3CA0A087WX78 387 aaPredicted RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ELOA3DA6NLF2 546 aaPredicted RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GOLGA8AA7E2F4 631 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 NEURL1BA8MQ27 555 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GOLGA8BA8MQT2 603 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 H0Y8X5 98 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ARNTLO00327 626 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 EXOC5O00471 708 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 MSTNO14793 375 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 MSCO60682 206 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 OFD1O75665 1012 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 PROCP04070 461 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 THBDP07204 575 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 LDHCP07864 332 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 YBX3P16989 372 aaKnown RBP eCLIP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ZKSCAN1P17029 563 aaPredicted RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GPR3P46089 330 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 DNM2P50570 870 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 RENBPP51606 427 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GTF2A2P52657 109 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 SNW1Q13573 536 aaKnown RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ZNF267Q14586 743 aaPredicted RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 CLUL1Q15846 466 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 LONRF1Q17RB8 773 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 SLC4A8Q2Y0W8 1093 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ELOA3BQ3SY89 546 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 CREB3L3Q68CJ9 461 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 C20orf204Q6ZNR8 217 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 MMS22LQ6ZRQ5 1243 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 OVCH1Q7RTY7 1134 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 SRGAP1Q7Z6B7 1085 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 WFDC8Q8IUA0 241 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 PPIL6Q8IXY8 311 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 NKAPQ8N5F7 415 aaKnown RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 EFHBQ8N7U6 833 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 BEND7Q8N7W2 519 aaPredicted RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 MFSD2AQ8NA29 543 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ZBTB34Q8NCN2 500 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GALNT11Q8NCW6 608 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ACRBPQ8NEB7 543 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms