RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ARIH2O95376 493 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 ASGR1P07306 291 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 TGFB3P10600 412 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 PTGS1P23219 599 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 CCND2P30279 289 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 SCRN1Q12765 414 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 LY6KQ17RY6 165 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 XRRA1Q6P2D8 792 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 KCNV1Q6PIU1 500 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 IL31RAQ8NI17 732 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 SLC26A6Q9BXS9 759 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 ZMYND12Q9H0C1 365 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 GLT8D2Q9H1C3 349 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 DDX41Q9UJV9 622 aaKnown RBP12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 FRMPD4Q14CM0 1322 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 A0A1W2PQ45 241 aaPredicted RBP12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 A0A1W2PQY0 241 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 A6NJR5 290 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 ZEB2O60315 1214 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 FOSP01100 380 aaPredicted RBP12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 ATN1P54259 1190 aaPredicted RBP12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 BEX3Q00994 111 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 SNX17Q15036 470 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 UBE2SQ16763 222 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 PCNX4Q63HM2 1172 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 CPLX2Q6PUV4 134 aaKnown RBP12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 COPS5Q92905 334 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 SH3GLB2Q9NR46 395 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 RTEL1Q9NZ71 1219 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 ELP1O95163 1332 aa12.8□□□□□ -0.36
SCARNA20-201ENST00000516768 ESYT2A0FGR8 921 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 SPDYE3A6NKU9 549 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 SPATA31C2B4DYI2 1134 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 H0YGN5 161 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 CABYRO75952 493 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 ICAM3P32942 547 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 ADCY7P51828 1080 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 SP2Q02086 613 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 ME3Q16798 604 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 TRIM22Q8IYM9 498 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 CCDC12Q8WUD4 166 aaPredicted RBP12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 GLT1D1Q96MS3 346 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 C6orf50Q9HD87 102 aa12.79□□□□□ -0.36
SCARNA20-201ENST00000516768 DEXIO95424 95 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 GH1P01241 217 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 GNA11P29992 359 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 CPT1AP50416 773 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 CDK7P50613 346 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 LAMC2Q13753 1193 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 BRDTQ58F21 947 aaPredicted RBP12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 PRPF38BQ5VTL8 546 aaKnown RBP12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 MCTP2Q6DN12 878 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 CXCL17Q6UXB2 119 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 OR6J1Q8NGC5 347 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 EMID1Q96A84 441 aaPredicted RBP12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 VTI1AQ96AJ9 217 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 STARD7Q9NQZ5 370 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
SCARNA20-201ENST00000516768 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 MAFGO15525 162 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 KPNA6O60684 536 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 CDKL5O76039 1030 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 CTDNEP1O95476 244 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 RTP1P59025 263 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 PURAQ00577 322 aaKnown RBP12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 ARHGAP1Q07960 439 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 AP3B2Q13367 1082 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 GNPTABQ3T906 1256 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 CELF3Q5SZQ8 465 aaKnown RBP12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 ANKRD33Q7Z3H0 272 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 SLC43A3Q8NBI5 491 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 TOX2Q96NM4 488 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 EHMT1Q9H9B1 1298 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 POLR3EQ9NVU0 708 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 TMEM260Q9NX78 707 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 UBIAD1Q9Y5Z9 338 aa12.77□□□□□ -0.37
SCARNA20-201ENST00000516768 FRMPD3Q5JV73 1810 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 ARVCFO00192 962 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 FIBPO43427 364 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 PPFIA4O75335 1185 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 LARGE1O95461 756 aa12.76□□□□□ -0.37
SCARNA20-201ENST00000516768 ITGB5P18084 799 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms