RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 RUFY3Q7L099 469 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 REC114Q7Z4M0 266 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 MCATQ8IVS2 390 aaKnown RBP7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 MRPL41Q8IXM3 137 aaKnown RBP7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 CCAR2Q8N163 923 aaKnown RBP7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 Q8N3U1 123 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 C8orf58Q8NAV2 365 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 SPC24Q8NBT2 197 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 SLC26A8Q96RN1 970 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 LRRC4CQ9HCJ2 640 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 DNAI1Q9UI46 699 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 SNX14Q9Y5W7 946 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 PTPRMP28827 1452 aa7.36□□□□□ -1.23
RN7SKP248-201ENST00000516278 KINO60870 393 aaKnown RBP7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 HOXB7P09629 217 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 PLCG1P19174 1290 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 SFPQP23246 707 aaKnown RBP eCLIP7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 AK2P54819 239 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 BRD3Q15059 726 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 LRRFIP1Q32MZ4 808 aaKnown RBP7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 TMEM201Q5SNT2 666 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 DTX1Q86Y01 620 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 TSPYL6Q8N831 410 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 FBXO27Q8NI29 283 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 BICD2Q8TD16 824 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 SSH3Q8TE77 659 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 EVI5LQ96CN4 794 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 MKNK2Q9HBH9 465 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 ARFGAP3Q9NP61 516 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 HYPKQ9NX55 129 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 TJP2Q9UDY2 1190 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 GTF2IRD1Q9UHL9 959 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 CHD2O14647 1828 aaKnown RBP7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 CD163L1Q9NR16 1453 aa7.35□□□□□ -1.23
RN7SKP248-201ENST00000516278 RFX7Q2KHR2 1363 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 CACNA1FO60840 1977 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 A0A1B0GUL7 405 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 VPS37CA5D8V6 355 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 RPS6KA5O75582 802 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 UBTFL1P0CB47 393 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 CASTP20810 708 aaKnown RBP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 CALRP27797 417 aaKnown RBP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 MSMPQ1L6U9 139 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 FAM214BQ7L5A3 538 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 KIAA0825Q8IV33 1275 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 C16orf71Q8IYS4 520 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 DNAAF4Q8WXU2 420 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 PPM1EQ8WY54 764 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 SPON2Q9BUD6 331 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 NT5C1AQ9BXI3 368 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 DEF6Q9H4E7 631 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 DACT1Q9NYF0 836 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 ZNF215Q9UL58 517 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 CORINQ9Y5Q5 1042 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 AK9Q5TCS8 1911 aa7.34□□□□□ -1.23
RN7SKP248-201ENST00000516278 SBNO1A3KN83 1393 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 KNDC1Q76NI1 1749 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 CCDC69A6NI79 296 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 IGF2BP3O00425 579 aaKnown RBP eCLIP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 IKBKBO14920 756 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 CLGNO14967 610 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 TLR3O15455 904 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 SLITRK5O94991 958 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 SPINK2P20155 84 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 CASQ1P31415 396 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 PRAMEF13Q5VWM6 474 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 FBXO38Q6PIJ6 1188 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 BLOC1S2Q6QNY1 142 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 METTL16Q86W50 562 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 CLASRPQ8N2M8 674 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 FBXO18Q8NFZ0 1043 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 CACTINQ8WUQ7 758 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 LEO1Q8WVC0 666 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 HNRNPLLQ8WVV9 542 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 ACSF2Q96CM8 615 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 CCDC34Q96HJ3 373 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 MEIS3Q99687 375 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 CDK19Q9BWU1 502 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 UPF3BQ9BZI7 483 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 LSG1Q9H089 658 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 BSDC1Q9NW68 430 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 ZC3H7BQ9UGR2 993 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 HOOK1Q9UJC3 728 aaKnown RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 POLR3KQ9Y2Y1 108 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 NRKQ7Z2Y5 1582 aa7.33□□□□□ -1.24
RN7SKP248-201ENST00000516278 A0A1W2PQ27 194 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 A0A1W2PQ64 194 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 A0A1W2PQD8 194 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 CCDC151A5D8V7 595 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 H3BQV1 296 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 GRIN3BO60391 1043 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 ZRANB2O95218 330 aaKnown RBP eCLIP7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 HTR3BO95264 441 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 SMC2O95347 1197 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 EOMESO95936 686 aa7.32□□□□□ -1.24
RN7SKP248-201ENST00000516278 PNMA6AP0CW24 399 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms