RNA–Protein interactions for RNA: ENST00000516226.1

RNU6-397P-201, Transcript of RNA, U6 small nuclear 397, pseudogene, humanhuman

BASIC

Gene RNU6-397P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-397P-201ENST00000516226 ZNF652Q9Y2D9 606 aa3.93□□□□□ -1.78
RNU6-397P-201ENST00000516226 NOP56O00567 594 aaKnown RBP3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 MYO1BO43795 1136 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 PPP1R11O60927 126 aaPredicted RBP3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 VAMP4O75379 141 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 SELENOPP49908 381 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 EPHB4P54760 987 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 CASP7P55210 303 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 RPL11P62913 178 aaKnown RBP3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 KCNAB2Q13303 367 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 PRAMEF18Q5VWM3 479 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 CIR1Q86X95 450 aaPredicted RBP3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 RASGRP4Q8TDF6 673 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 CLIC6Q96NY7 704 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 TMEM209Q96SK2 561 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 APBA2Q99767 749 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 SLITRK6Q9H5Y7 841 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 L2HGDHQ9H9P8 463 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 CYP26B1Q9NR63 512 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 MARCH2Q9P0N8 246 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 DDX41Q9UJV9 622 aaKnown RBP3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 AKT3Q9Y243 479 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 COA3Q9Y2R0 106 aaPredicted RBP3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 EMC9Q9Y3B6 208 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 TCAF1Q9Y4C2 921 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 X6R8D5 127 aa3.92□□□□□ -1.78
RNU6-397P-201ENST00000516226 A0A1W2PQH9 124 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 NPEPPSL1A6NEC2 478 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 C22orf46C9J442 243 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 SGSM2O43147 1006 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 CYP1A1P04798 512 aaPredicted RBP3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 THBDP07204 575 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 PLS3P13797 630 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 ACVRL1P37023 503 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 NCAPHQ15003 741 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 LDLRAD1Q5T700 205 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 MCTP2Q6DN12 878 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 BVESQ8NE79 360 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 DNERQ8NFT8 737 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 SH3RF3Q8TEJ3 882 aaPredicted RBP3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 KLHL6Q8WZ60 621 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 FGD4Q96M96 766 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 TMEM168Q9H0V1 697 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 CLEC1BQ9P126 229 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 STRIP2Q9ULQ0 834 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 TESMINQ9Y4I5 508 aa3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 TIMM13Q9Y5L4 95 aaPredicted RBP3.91□□□□□ -1.78
RNU6-397P-201ENST00000516226 H7BY64 318 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 DDX3XO00571 662 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 B4GALT3O60512 393 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 MAFKO60675 156 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 CHGBP05060 677 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 PPP2CBP62714 309 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 PPP2CAP67775 309 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 SCRN1Q12765 414 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 TESK1Q15569 626 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 SLFN13Q68D06 897 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 ARHGEF18Q6ZSZ5 1173 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 MILR1Q7Z6M3 343 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 TRIM59Q8IWR1 403 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 KLHL36Q8N4N3 616 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 PHOSPHO1Q8TCT1 267 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 CCDC140Q96MF4 163 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 YTHDC1Q96MU7 727 aaKnown RBP3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 MRIQ9BWK5 157 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 VPS11Q9H270 941 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 NKX2-4Q9H2Z4 354 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 BARX1Q9HBU1 254 aaPredicted RBP3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 CD248Q9HCU0 757 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 GINM1Q9NU53 330 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 HSPBP1Q9NZL4 362 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 PPP4R1LQ9P1A2 415 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 ST6GALNAC2Q9UJ37 374 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 SIT1Q9Y3P8 196 aa3.9□□□□□ -1.79
RNU6-397P-201ENST00000516226 PATE3B3GLJ2 98 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 SCAMP3O14828 347 aaKnown RBP3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 HGSO14964 777 aaPredicted RBP3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 KCNH1O95259 989 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 CPP00450 1065 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 ZNF16P17020 682 aaPredicted RBP3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 VAMP1P23763 118 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 PAK2Q13177 524 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 ADAM9Q13443 819 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 CDSNQ15517 529 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 ZNF394Q53GI3 561 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 HS1BP3Q53T59 392 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 EMC4Q5J8M3 183 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 ACBD5Q5T8D3 534 aaPredicted RBP3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 CYP4F22Q6NT55 531 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 VHLLQ6RSH7 139 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 ZNF513Q8N8E2 541 aaPredicted RBP3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 NPLOC4Q8TAT6 608 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 DPF3Q92784 378 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 GPRASP2Q96D09 838 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 TOE1Q96GM8 510 aaKnown RBP3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 BACH2Q9BYV9 841 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 GZF1Q9H116 711 aaPredicted RBP3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
RNU6-397P-201ENST00000516226 DTLQ9NZJ0 730 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms