RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 LARP1BQ659C4 914 aaKnown RBP4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 MIB1Q86YT6 1006 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 TEX2Q8IWB9 1127 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 TTLL6Q8N841 843 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 BTN2A2Q8WVV5 523 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 DDX11Q96FC9 970 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 SPATA6Q9NWH7 488 aaPredicted RBP4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 PRKAG3Q9UGI9 489 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 MRVI1Q9Y6F6 885 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 X6R8D5 127 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 SGSM2O43147 1006 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 SUSD5O60279 629 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 DDAH1O94760 285 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 SNRPB2P08579 225 aaKnown RBP4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 ADRB1P08588 477 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 CYP4F3Q08477 520 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 EFEMP1Q12805 493 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 TESK1Q15569 626 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 ACBD5Q5T8D3 534 aaPredicted RBP4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 CEP68Q76N32 757 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 ZNF227Q86WZ6 799 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 Q8N1Y9 231 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 TRMT2BQ96GJ1 504 aaKnown RBP4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 GORASP1Q9BQQ3 440 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 C11orf84Q9BUA3 381 aaPredicted RBP4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 LNPKQ9C0E8 428 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 PALD1Q9ULE6 856 aa4.86□□□□□ -1.63
RNU4-49P-201ENST00000516080 K7ESM1 405 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 RPL13P26373 211 aaKnown RBP4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 THBS2P35442 1172 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 LTBRP36941 435 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 BCL6P41182 706 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 ECI1P42126 302 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 SMAD4Q13485 552 aaKnown RBP4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 CHRNA2Q15822 529 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 CD300LDQ6UXZ3 194 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 MILR1Q7Z6M3 343 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 FERMT3Q86UX7 667 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 ZNF761Q86XN6 746 aaPredicted RBP4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 FAM126BQ8IXS8 530 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 KYQ8NBH2 561 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 DDX1Q92499 740 aaKnown RBP4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 TMEM169Q96HH4 297 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 LGR4Q9BXB1 951 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 EPN3Q9H201 632 aa4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 COA3Q9Y2R0 106 aaPredicted RBP4.85□□□□□ -1.63
RNU4-49P-201ENST00000516080 B2RBV5 119 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 H7BY64 318 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 AGRPO00253 132 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 TBX1O43435 398 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 FPR2P25090 351 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 CNR2P34972 360 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 KCNJ6P48051 423 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 KIAA2012Q0VF49 1180 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 EEPD1Q7L9B9 569 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 FAM124AQ86V42 546 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 CCDC103Q8IW40 242 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 KREMEN2Q8NCW0 462 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 ADAMTS17Q8TE56 1095 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 YIPF4Q9BSR8 244 aa4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 TMEFF2Q9UIK5 374 aaPredicted RBP4.84□□□□□ -1.63
RNU4-49P-201ENST00000516080 HGSO14964 777 aaPredicted RBP4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 TCF3P15923 654 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 ETFBP38117 255 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 GFRA1P56159 465 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 NKX3-2P78367 333 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 NFKB2Q00653 900 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 ARID5AQ03989 594 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 LSAMPQ13449 338 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 FAM26FQ5R3K3 315 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 PPIL6Q8IXY8 311 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 FAM26EQ8N5C1 309 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 RCBTB1Q8NDN9 531 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 ZNF652Q9Y2D9 606 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 R3HCC1Q9Y3T6 440 aaKnown RBP4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 PCDHA2Q9Y5H9 948 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 DUSP10Q9Y6W6 482 aa4.83□□□□□ -1.64
RNU4-49P-201ENST00000516080 ARNTLO00327 626 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 DGKIO75912 1065 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 ITGA1P56199 1179 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 SF1Q15637 639 aaKnown RBP4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 ZNF827Q17R98 1081 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 RGL3Q3MIN7 710 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 MRM1Q6IN84 353 aaKnown RBP4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 BORAQ6PGQ7 559 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 NLRP10Q86W26 655 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 CHAMP1Q96JM3 812 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 JAG2Q9Y219 1238 aa4.82□□□□□ -1.64
RNU4-49P-201ENST00000516080 GJB6O95452 261 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 ITGB3P05106 788 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 FGRP09769 529 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 STAT5AP42229 794 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 KRTAP10-2P60368 255 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 PRSS53Q2L4Q9 553 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 EMC4Q5J8M3 183 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 SLC35F1Q5T1Q4 408 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 HHIPL2Q6UWX4 724 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms