RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 KCNA10Q16322 511 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 SLFN13Q68D06 897 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 ANKRD33Q7Z3H0 272 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 GMCL1P1Q8NEA9 526 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 KLHDC9Q8NEP7 349 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 CHST13Q8NET6 341 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 MAFAQ8NHW3 353 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 MYLIPQ8WY64 445 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 MKL1Q969V6 931 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 ZMYND15Q9H091 742 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 NAPBQ9H115 298 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 HOMER2Q9NSB8 354 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 ELP1O95163 1332 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 TTC41PQ6P2S7 1318 aa10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 TRIP12Q14669 1992 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE2-212ENST00000515533 MUC3AQ02505 3323 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 ASGR1P07306 291 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 CST5P28325 142 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 CCDC144BQ3MJ40 725 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 GNASQ5JWF2 1037 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 ARMCX2Q7L311 632 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 NEDD1Q8NHV4 660 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 FSD1Q9BTV5 496 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 ACAD9Q9H845 621 aa10.55□□□□□ -0.72
CDC42SE2-212ENST00000515533 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 MYADML2A6NDP7 307 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 TMEM232C9JQI7 657 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 TIMP1P01033 207 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 SLC1A4P43007 532 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 EPHB4P54760 987 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 GJA9P57773 515 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 TFAP4Q01664 338 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 PPARAQ07869 468 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 SCN5AQ14524 2016 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 MFSD5Q6N075 450 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 NOL8Q76FK4 1167 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 FAM160B2Q86V87 743 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 CCDC144CPQ8IYA2 1237 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 FAM174AQ8TBP5 190 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 STX8Q9UNK0 236 aa10.54□□□□□ -0.72
CDC42SE2-212ENST00000515533 MYH7BA7E2Y1 1941 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 KIAA1217Q5T5P2 1943 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 TSPY2A6NKD2 308 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 ADCY6O43306 1168 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 PPIGQ13427 754 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 CCSAPQ6IQ19 270 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 TMEM199Q8N511 208 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 CHMP4CQ96CF2 233 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 GMCL1Q96IK5 515 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 FGD4Q96M96 766 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 CDK15Q96Q40 435 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 SEC62Q99442 399 aaKnown RBP10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 UPF3AQ9H1J1 476 aaKnown RBP10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 RNF146Q9NTX7 359 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 TBX21Q9UL17 535 aa10.53□□□□□ -0.72
CDC42SE2-212ENST00000515533 ASB14A6NK59 587 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 ARVCFO00192 962 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 MAN1A2O60476 641 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 ALAS1P13196 640 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 MCCP23508 829 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 CDK7P50613 346 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 CNTN2Q02246 1040 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 TNFAIP2Q03169 654 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 TKFCQ3LXA3 575 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 PSRC1Q6PGN9 363 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 CCDC129Q6ZRS4 1044 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 FAM133AQ8N9E0 248 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 PI4K2BQ8TCG2 481 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 STAG1Q8WVM7 1258 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 TRERF1Q96PN7 1200 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 PPP1R12CQ9BZL4 782 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 A1CFQ9NQ94 594 aaKnown RBP10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 CHD7Q9P2D1 2997 aa10.52□□□□□ -0.73
CDC42SE2-212ENST00000515533 CHD9Q3L8U1 2897 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 LAMA4Q16363 1823 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 TANC1Q9C0D5 1861 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 ZEB2O60315 1214 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 ZIC2O95409 532 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 MX1P20591 662 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 CTHP32929 405 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 BEX3Q00994 111 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 ZMYM1Q5SVZ6 1142 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 KCTD1Q719H9 257 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 TLK2Q86UE8 772 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 FAM126BQ8IXS8 530 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 TIFAQ96CG3 184 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 ITPKCQ96DU7 683 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 AGBL1Q96MI9 1066 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 KATNBL1Q9H079 304 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 AP5M1Q9H0R1 490 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 ZNF576Q9H609 170 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 ZFAND3Q9H8U3 227 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms