RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CDK7P50613 346 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
CLCN3-210ENST00000515420 BEX3Q00994 111 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 APOBRQ0VD83 1088 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 XRRA1Q6P2D8 792 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 CCDC82Q8N4S0 544 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 SMARCC2Q8TAQ2 1214 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 IL17RAQ96F46 866 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 PSTPIP2Q9H939 334 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 PDLIM7Q9NR12 457 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 A6NJR5 290 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 DCDC2CA8MYV0 355 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 ARVCFO00192 962 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 ARIH2O95376 493 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 GH1P01241 217 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 CLTBP09497 229 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 TGFB3P10600 412 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 SYN1P17600 705 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 MAGEA10P43363 369 aaPredicted RBP14.71□□□□□ -0.05
CLCN3-210ENST00000515420 TLE2Q04725 743 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 TMEM63BQ5T3F8 832 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 SEPT14Q6ZU15 432 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 FCHSD1Q86WN1 690 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 SLC43A3Q8NBI5 491 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 EMID1Q96A84 441 aaPredicted RBP14.71□□□□□ -0.05
CLCN3-210ENST00000515420 GLT8D2Q9H1C3 349 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 TRIOBPQ9H2D6 2365 aa14.71□□□□□ -0.05
CLCN3-210ENST00000515420 MYH7BA7E2Y1 1941 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 RGS20O76081 388 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 PURAQ00577 322 aaKnown RBP14.7□□□□□ -0.06
CLCN3-210ENST00000515420 TOB2Q14106 344 aaPredicted RBP14.7□□□□□ -0.06
CLCN3-210ENST00000515420 GNPTABQ3T906 1256 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 PCNX4Q63HM2 1172 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 USP17L6PQ6QN14 398 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 POTEHQ6S545 545 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 CXCL17Q6UXB2 119 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 HEATR3Q7Z4Q2 680 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 VTI1AQ96AJ9 217 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 INPP4AQ96PE3 977 aaPredicted RBP14.7□□□□□ -0.06
CLCN3-210ENST00000515420 BARHL2Q9NY43 387 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 DDX41Q9UJV9 622 aaKnown RBP14.7□□□□□ -0.06
CLCN3-210ENST00000515420 NAP1L2Q9ULW6 460 aaPredicted RBP14.7□□□□□ -0.06
CLCN3-210ENST00000515420 MRVI1Q9Y6F6 885 aa14.7□□□□□ -0.06
CLCN3-210ENST00000515420 KIAA0355O15063 1070 aa14.69□□□□□ -0.06
CLCN3-210ENST00000515420 PQBP1O60828 265 aaKnown RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 MYCLP12524 364 aaPredicted RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 PTGS1P23219 599 aa14.69□□□□□ -0.06
CLCN3-210ENST00000515420 PDIA3P30101 505 aaKnown RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 ADD1P35611 737 aaKnown RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 FAAP100Q0VG06 881 aa14.69□□□□□ -0.06
CLCN3-210ENST00000515420 ITGA7Q13683 1181 aa14.69□□□□□ -0.06
CLCN3-210ENST00000515420 IL31RAQ8NI17 732 aa14.69□□□□□ -0.06
CLCN3-210ENST00000515420 COPS5Q92905 334 aa14.69□□□□□ -0.06
CLCN3-210ENST00000515420 GPKOWQ92917 476 aaPredicted RBP eCLIP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 ZNF274Q96GC6 653 aaPredicted RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 LBHD1Q9BQE6 289 aaPredicted RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 ALDH8A1Q9H2A2 487 aaPredicted RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 V9GY48 417 aaPredicted RBP14.69□□□□□ -0.06
CLCN3-210ENST00000515420 hCG_1642624A0A1W2PR95 340 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 TLR3O15455 904 aaKnown RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 PRPF3O43395 683 aaKnown RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 IFNAR1P17181 557 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 ICAM3P32942 547 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 NAPAP54920 295 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 MRPS9P82933 396 aaKnown RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 ARHGAP1Q07960 439 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 LAMC2Q13753 1193 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 PFKFB3Q16875 520 aaPredicted RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 LY6KQ17RY6 165 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 FAM126BQ8IXS8 530 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 CCDC12Q8WUD4 166 aaPredicted RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 MTG1Q9BT17 334 aaPredicted RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 RNF26Q9BY78 433 aaPredicted RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 UPF3BQ9BZI7 483 aaKnown RBP14.68□□□□□ -0.06
CLCN3-210ENST00000515420 EHMT1Q9H9B1 1298 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 RIC8AQ9NPQ8 531 aa14.68□□□□□ -0.06
CLCN3-210ENST00000515420 ESYT2A0FGR8 921 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 TRIM43BA6NCK2 446 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 SPDYE3A6NKU9 549 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 STXBP3O00186 592 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 FOSP01100 380 aaPredicted RBP14.67□□□□□ -0.06
CLCN3-210ENST00000515420 CD4P01730 458 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 MMP3P08254 477 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 HOXD8P13378 290 aaPredicted RBP14.67□□□□□ -0.06
CLCN3-210ENST00000515420 SCG2P13521 617 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 NTRK3Q16288 839 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 DHX37Q8IY37 1157 aaKnown RBP14.67□□□□□ -0.06
CLCN3-210ENST00000515420 PPTC7Q8NI37 304 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 TRIM43Q96BQ3 446 aaPredicted RBP14.67□□□□□ -0.06
CLCN3-210ENST00000515420 PRDM5Q9NQX1 630 aaPredicted RBP14.67□□□□□ -0.06
CLCN3-210ENST00000515420 PDRG1Q9NUG6 133 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 TMEM39AQ9NV64 488 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 TBX21Q9UL17 535 aa14.67□□□□□ -0.06
CLCN3-210ENST00000515420 GRIN2DO15399 1336 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 FIBPO43427 364 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 MYL3P08590 195 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 UBA1P22314 1058 aaKnown RBP14.66□□□□□ -0.06
CLCN3-210ENST00000515420 ADCY7P51828 1080 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms