RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 AK2P54819 239 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 GJA9P57773 515 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 RTP1P59025 263 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 SSRP1Q08945 709 aaKnown RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 FUT2Q10981 343 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 FSCN1Q16658 493 aaKnown RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 DUSP28Q4G0W2 176 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 SLC39A5Q6ZMH5 540 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 FBXL16Q8N461 479 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 PCSK9Q8NBP7 692 aaKnown RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 GLT1D1Q96MS3 346 aa13.24□□□□□ -0.29
SUB1-213ENST00000515355 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 PRDM5Q9NQX1 630 aaPredicted RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
SUB1-213ENST00000515355 STXBP3O00186 592 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 ARIH2O95376 493 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 SCG2P13521 617 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 ADCY7P51828 1080 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 ANKRD1Q15327 319 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 BRDTQ58F21 947 aaPredicted RBP13.23□□□□□ -0.29
SUB1-213ENST00000515355 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
SUB1-213ENST00000515355 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 KLHDC9Q8NEP7 349 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
SUB1-213ENST00000515355 PGBD1Q96JS3 809 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 C22orf23Q9BZE7 217 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 BARHL2Q9NY43 387 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 TPCN1Q9ULQ1 816 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 PHF24Q9UPV7 400 aa13.23□□□□□ -0.29
SUB1-213ENST00000515355 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 PRPF3O43395 683 aaKnown RBP13.22□□□□□ -0.29
SUB1-213ENST00000515355 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
SUB1-213ENST00000515355 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
SUB1-213ENST00000515355 TRIM60Q495X7 471 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 JAKMIP3Q5VZ66 844 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 CXCL17Q6UXB2 119 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 VSIG10LQ86VR7 867 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
SUB1-213ENST00000515355 UPF3AQ9H1J1 476 aaKnown RBP13.22□□□□□ -0.29
SUB1-213ENST00000515355 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 PRKAG2Q9UGJ0 569 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
SUB1-213ENST00000515355 RBM47A0AV96 593 aaKnown RBP13.21□□□□□ -0.29
SUB1-213ENST00000515355 MOXD2PA6NHM9 499 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 PIK3CDO00329 1044 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 NKRFO15226 690 aaKnown RBP eCLIP13.21□□□□□ -0.291e-14■□□□□ 8.9
SUB1-213ENST00000515355 GABBR2O75899 941 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 GH1P01241 217 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 IFNAR1P17181 557 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 CPT1AP50416 773 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 EVCP57679 992 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 GHRHRQ02643 423 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 SCRN1Q12765 414 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
SUB1-213ENST00000515355 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
SUB1-213ENST00000515355 AFG1LQ8WV93 481 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 RIC8AQ9NPQ8 531 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 PKD2L1Q9P0L9 805 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
SUB1-213ENST00000515355 Q9Y3F1 56 aa13.21□□□□□ -0.29
SUB1-213ENST00000515355 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 CTAGE5O15320 804 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 CST5P28325 142 aaPredicted RBP13.2□□□□□ -0.3
SUB1-213ENST00000515355 ZNF76P36508 570 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 NLRP5P59047 1200 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 PSMC6P62333 389 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 MRPS9P82933 396 aaKnown RBP13.2□□□□□ -0.3
SUB1-213ENST00000515355 SP4Q02446 784 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 TLE2Q04725 743 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 NTRK3Q16288 839 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 PKN1Q16512 942 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 GNPTABQ3T906 1256 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
SUB1-213ENST00000515355 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
SUB1-213ENST00000515355 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
SUB1-213ENST00000515355 MLXIPQ9HAP2 919 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 DDX41Q9UJV9 622 aaKnown RBP13.2□□□□□ -0.3
SUB1-213ENST00000515355 PDE4DIPQ5VU43 2346 aa13.2□□□□□ -0.3
SUB1-213ENST00000515355 LCTP09848 1927 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 PFKFB2O60825 505 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 CDKL5O76039 1030 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 RGS20O76081 388 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 GGPS1O95749 300 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 FOSBP53539 338 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 ME3Q16798 604 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 PCNX4Q63HM2 1172 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 NLRX1Q86UT6 975 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms