RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 TCFL5Q9UL49 500 aa6.86□□□□□ -1.31
RFC1-216ENST00000514572 CBLCQ9ULV8 474 aa6.86□□□□□ -1.31
RFC1-216ENST00000514572 LOC102724159A0A0B4J2E5 919 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 HMX2A2RU54 273 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 FAM170BA6NMN3 283 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 WASH4PA8MWX3 477 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 PRPF3O43395 683 aaKnown RBP6.85□□□□□ -1.31
RFC1-216ENST00000514572 ULK1O75385 1050 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 GRK2P25098 689 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 GRK3P35626 688 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 PCBP3P57721 371 aaKnown RBP6.85□□□□□ -1.31
RFC1-216ENST00000514572 KRT85P78386 507 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 FAPQ12884 760 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 SART3Q15020 963 aaKnown RBP6.85□□□□□ -1.31
RFC1-216ENST00000514572 PWP2Q15269 919 aaKnown RBP6.85□□□□□ -1.31
RFC1-216ENST00000514572 ABCB5Q2M3G0 1257 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 FAM47CQ5HY64 1035 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 IQSEC1Q6DN90 963 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 RNF111Q6ZNA4 994 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 C14orf80Q86SX3 495 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 NLRP10Q86W26 655 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 EFHBQ8N7U6 833 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 GPR101Q96P66 508 aaPredicted RBP6.85□□□□□ -1.31
RFC1-216ENST00000514572 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 ZKSCAN5Q9Y2L8 839 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 PCDHA2Q9Y5H9 948 aa6.85□□□□□ -1.31
RFC1-216ENST00000514572 PTPDC1A2A3K4 754 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 FAM47E-STBD1D6RA91 191 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 TGM5O43548 720 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 ENDOUP21128 410 aaKnown RBP6.84□□□□□ -1.31
RFC1-216ENST00000514572 TPP2P29144 1249 aaPredicted RBP6.84□□□□□ -1.31
RFC1-216ENST00000514572 IARSP41252 1262 aaKnown RBP6.84□□□□□ -1.31
RFC1-216ENST00000514572 CLCN7P51798 805 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 SESN3P58005 492 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 RHBDL3P58872 404 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 CYP27A1Q02318 531 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 UBE4AQ14139 1066 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 HABP4Q5JVS0 413 aaKnown RBP6.84□□□□□ -1.31
RFC1-216ENST00000514572 ARNT2Q9HBZ2 717 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 SEMA3GQ9NS98 782 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 OXSMQ9NWU1 459 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 H2AFY2Q9P0M6 372 aaPredicted RBP6.84□□□□□ -1.31
RFC1-216ENST00000514572 ZNF180Q9UJW8 692 aa6.84□□□□□ -1.31
RFC1-216ENST00000514572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.83□□□□□ -1.32
RFC1-216ENST00000514572 FAM155AB1AL88 458 aaPredicted RBP6.83□□□□□ -1.32
RFC1-216ENST00000514572 MSTNO14793 375 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 GSTA4O15217 222 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 CAND2O75155 1236 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 F13BP05160 661 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 ATF3P18847 181 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 KPNA1P52294 538 aaPredicted RBP6.83□□□□□ -1.32
RFC1-216ENST00000514572 KLF1Q13351 362 aaPredicted RBP6.83□□□□□ -1.32
RFC1-216ENST00000514572 ARHGAP44Q17R89 818 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 TMEM240Q5SV17 173 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 CYP2R1Q6VVX0 501 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 TMEM52Q8NDY8 209 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 DPF3Q92784 378 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 SLC5A5Q92911 643 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 FUBP3Q96I24 572 aaKnown RBP eCLIP6.83□□□□□ -1.32
RFC1-216ENST00000514572 SPOCK3Q9BQ16 436 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 SMURF1Q9HCE7 757 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 ERVK13-1Q9NX77 482 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 PLAGL2Q9UPG8 496 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 RAXQ9Y2V3 346 aa6.83□□□□□ -1.32
RFC1-216ENST00000514572 C7orf72A4D263 438 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 CEACAM5P06731 702 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 ZBTB48P10074 688 aaPredicted RBP6.82□□□□□ -1.32
RFC1-216ENST00000514572 ZSCAN20P17040 1043 aaPredicted RBP6.82□□□□□ -1.32
RFC1-216ENST00000514572 CHRNA4P43681 627 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 DNM2P50570 870 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 PHC1P78364 1004 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 TEKQ02763 1124 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 LSAMPQ13449 338 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 MLC1Q15049 377 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 PTPN21Q16825 1174 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 CXorf57Q6NSI4 855 aaKnown RBP6.82□□□□□ -1.32
RFC1-216ENST00000514572 HHIPL2Q6UWX4 724 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 CISD2Q8N5K1 135 aaKnown RBP6.82□□□□□ -1.32
RFC1-216ENST00000514572 JPH3Q8WXH2 748 aaPredicted RBP6.82□□□□□ -1.32
RFC1-216ENST00000514572 AHCYL2Q96HN2 611 aaKnown RBP6.82□□□□□ -1.32
RFC1-216ENST00000514572 ADGRE2Q9UHX3 823 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 PCDHA11Q9Y5I1 949 aa6.82□□□□□ -1.32
RFC1-216ENST00000514572 TIMM13Q9Y5L4 95 aaPredicted RBP6.82□□□□□ -1.32
RFC1-216ENST00000514572 TRIM75PA6NK02 468 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 MYO1BO43795 1136 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 AMY2AP04746 511 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 RBP3P10745 1247 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 AMY2BP19961 511 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 GRIK1P39086 918 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 GTF2A2P52657 109 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 TERF2Q15554 542 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 CDKAL1Q5VV42 579 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 RNF43Q68DV7 783 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 FSTL4Q6MZW2 842 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 TMPRSS7Q7RTY8 843 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 C11orf74Q86VG3 221 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
RFC1-216ENST00000514572 FAM181AQ8N9Y4 354 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms