RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 RASSF10A6NK89 507 aa22.3■■□□□ 1.16
SSBP2-218ENST00000514493 FAM86B1E9PN63 330 aa22.3■■□□□ 1.16
SSBP2-218ENST00000514493 ZNF202O95125 648 aa22.3■■□□□ 1.16
SSBP2-218ENST00000514493 FAM86B2P0C5J1 330 aa22.3■■□□□ 1.16
SSBP2-218ENST00000514493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.3■■□□□ 1.16
SSBP2-218ENST00000514493 LENG9Q96B70 501 aa22.3■■□□□ 1.16
SSBP2-218ENST00000514493 HHIPL1Q96JK4 782 aa22.3■■□□□ 1.16
SSBP2-218ENST00000514493 PFASO15067 1338 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 ERVK-9P63128 1117 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 ERVK-24P63145 666 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 UBXN2AP68543 259 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 PAXIP1Q6ZW49 1069 aaPredicted RBP22.29■■□□□ 1.16
SSBP2-218ENST00000514493 CKAP2LQ8IYA6 745 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 DNAJC5GQ8N7S2 189 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 SYMPKQ92797 1274 aaKnown RBP22.29■■□□□ 1.16
SSBP2-218ENST00000514493 TIGD1Q96MW7 591 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 KCNMB3Q9NPA1 279 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 KCNH3Q9ULD8 1083 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 LRRC37A2A6NM11 1700 aa22.29■■□□□ 1.16
SSBP2-218ENST00000514493 CCDC192P0DO97 292 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 ZNF76P36508 570 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 GCLCP48506 637 aaPredicted RBP22.28■■□□□ 1.16
SSBP2-218ENST00000514493 PRR16Q569H4 304 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 NCAPG2Q86XI2 1143 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 HAS1Q92839 578 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 TAAR1Q96RJ0 339 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 ZIC5Q96T25 663 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
SSBP2-218ENST00000514493 PXMP2Q9NR77 195 aa22.28■■□□□ 1.16
SSBP2-218ENST00000514493 IGLV3-22A0A075B6J6 115 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 FAM155AB1AL88 458 aaPredicted RBP22.27■■□□□ 1.16
SSBP2-218ENST00000514493 ERCC3P19447 782 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 FXR2P51116 673 aaKnown RBP eCLIP22.27■■□□□ 1.16
SSBP2-218ENST00000514493 USP49Q70CQ1 688 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 IL31RAQ8NI17 732 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 ETNPPLQ8TBG4 499 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 CCDC102AQ96A19 550 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 AK8Q96MA6 479 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 RMDN3Q96TC7 470 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 PLXNA1Q9UIW2 1896 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 TBX3O15119 743 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 VEGFBP49765 207 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 TMEM266Q2M3C6 531 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 PCNX4Q63HM2 1172 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 SHCBP1Q8NEM2 672 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 EPSTI1Q96J88 318 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 SDF4Q9BRK5 362 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 RBSNQ9H1K0 784 aa22.27■■□□□ 1.16
SSBP2-218ENST00000514493 EIF2AK2P19525 551 aaKnown RBP22.26■■□□□ 1.15
SSBP2-218ENST00000514493 TXKP42681 527 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 SETQ01105 290 aaPredicted RBP22.26■■□□□ 1.15
SSBP2-218ENST00000514493 PGM5Q15124 567 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 Q3C1V9 767 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 CEP55Q53EZ4 464 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 SLFN12Q8IYM2 578 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 ANKRD35Q8N283 1001 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 IGSF22Q8N9C0 903 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 PDCD2LQ9BRP1 358 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 MORF4L1Q9UBU8 362 aa22.26■■□□□ 1.15
SSBP2-218ENST00000514493 IGF2BP3O00425 579 aaKnown RBP eCLIP22.25■■□□□ 1.15
SSBP2-218ENST00000514493 AOC2O75106 756 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 ARHGEF16Q5VV41 709 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 CYP2W1Q8TAV3 490 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 CAPNS2Q96L46 248 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 PURBQ96QR8 312 aaKnown RBP22.25■■□□□ 1.15
SSBP2-218ENST00000514493 MROH8Q9H579 483 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 TXLNAP40222 546 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 TECP42680 631 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 TYRO3Q06418 890 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 XRRA1Q6P2D8 792 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 GPRC5AQ8NFJ5 357 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 RAB34Q9BZG1 259 aa22.25■■□□□ 1.15
SSBP2-218ENST00000514493 TTC12Q9H892 705 aaPredicted RBP22.25■■□□□ 1.15
SSBP2-218ENST00000514493 MARCH6O60337 910 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 XRCC6P12956 609 aaKnown RBP eCLIP22.24■■□□□ 1.15
SSBP2-218ENST00000514493 CCNA1P78396 465 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 SASS6Q6UVJ0 657 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 NIPA1Q7RTP0 329 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 PLA2G4DQ86XP0 818 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 ANKRD13CQ8N6S4 541 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 NSUN6Q8TEA1 469 aaKnown RBP22.24■■□□□ 1.15
SSBP2-218ENST00000514493 FAM20AQ96MK3 541 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 ADGRA2Q96PE1 1338 aa22.24■■□□□ 1.15
SSBP2-218ENST00000514493 MEIS1O00470 390 aa22.23■■□□□ 1.15
SSBP2-218ENST00000514493 MSH4O15457 936 aa22.23■■□□□ 1.15
SSBP2-218ENST00000514493 INHBEP58166 350 aa22.23■■□□□ 1.15
SSBP2-218ENST00000514493 MXRA8Q9BRK3 442 aa22.23■■□□□ 1.15
SSBP2-218ENST00000514493 CCSER1Q9C0I3 900 aa22.23■■□□□ 1.15
SSBP2-218ENST00000514493 UBIAD1Q9Y5Z9 338 aa22.23■■□□□ 1.15
SSBP2-218ENST00000514493 MCM3APO60318 1980 aa22.23■■□□□ 1.15
SSBP2-218ENST00000514493 A0A087X0B3 334 aa22.22■■□□□ 1.15
SSBP2-218ENST00000514493 PP2D1A8MPX8 630 aa22.22■■□□□ 1.15
SSBP2-218ENST00000514493 POLR2DO15514 142 aaKnown RBP22.22■■□□□ 1.15
SSBP2-218ENST00000514493 BCRP11274 1271 aa22.22■■□□□ 1.15
SSBP2-218ENST00000514493 CCND2P30279 289 aa22.22■■□□□ 1.15
SSBP2-218ENST00000514493 MRPS9P82933 396 aaKnown RBP22.22■■□□□ 1.15
SSBP2-218ENST00000514493 SREBF2Q12772 1141 aa22.22■■□□□ 1.15
SSBP2-218ENST00000514493 PDIA5Q14554 519 aa22.22■■□□□ 1.15
SSBP2-218ENST00000514493 FAM110CQ1W6H9 321 aa22.22■■□□□ 1.15
SSBP2-218ENST00000514493 KRBA2Q6ZNG9 492 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms