RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 IL23AQ9NPF7 189 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 TRMT13Q9NUP7 481 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 CHD9Q3L8U1 2897 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 TMEM265A0A087WTH1 108 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 CDC45O75419 566 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 PLEKHA8P1O95397 391 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 SUPT20HL2P0C7V6 817 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 ACRP10323 421 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 NFXL1Q6ZNB6 911 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 VSIG10LQ86VR7 867 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 TMTC2Q8N394 836 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 RRP36Q96EU6 259 aaKnown RBP12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 LZTS2Q9BRK4 669 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 TTYH1Q9H313 450 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 TANC1Q9C0D5 1861 aa12.1□□□□□ -0.47
HMGXB3-205ENST00000514469 EYSQ5T1H1 3165 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 CALM1P0DP23 149 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 CALM2P0DP24 149 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 CALM3P0DP25 149 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 CYP2C9P11712 490 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 MYCLP12524 364 aaPredicted RBP12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 HOXD8P13378 290 aaPredicted RBP12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 CCND2P30279 289 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 GNAQP50148 359 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 CCL23P55773 120 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 FAM47CQ5HY64 1035 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 SRBD1Q8N5C6 995 aaKnown RBP12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 PPTC7Q8NI37 304 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 KAT2BQ92831 832 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 VWCEQ96DN2 955 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 FAM161BQ96MY7 647 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 LRRC2Q9BYS8 371 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 SEMA6BQ9H3T3 888 aa12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
HMGXB3-205ENST00000514469 PIK3CDO00329 1044 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 F2P00734 622 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 RXRAP19793 462 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 UBA1P22314 1058 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 DNAJB2P25686 324 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 DGKDQ16760 1214 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 TSGA10IPQ3SY00 556 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 FCHSD1Q86WN1 690 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 PPP1R13LQ8WUF5 828 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 SCLYQ96I15 445 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 SLC12A7Q9Y666 1083 aa12.08□□□□□ -0.48
HMGXB3-205ENST00000514469 MEIS2O14770 477 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 STAM2O75886 525 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 GGPS1O95749 300 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 FGBP02675 491 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 PFKMP08237 780 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 TGFB3P10600 412 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 MRPS9P82933 396 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 EXOSC10Q01780 885 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 SP2Q02086 613 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 CELF3Q5SZQ8 465 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 MYSM1Q5VVJ2 828 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 RAB11FIP4Q86YS3 637 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 DHX37Q8IY37 1157 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 CMTR1Q8N1G2 835 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 CCDC136Q96JN2 1154 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 INPP4AQ96PE3 977 aaPredicted RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 CTAGE1Q96RT6 745 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 CDX2Q99626 313 aaPredicted RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 CXXC1Q9P0U4 656 aaPredicted RBP12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 CNTNAP5Q8WYK1 1306 aa12.07□□□□□ -0.48
HMGXB3-205ENST00000514469 UNC80Q8N2C7 3258 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 HAS3O00219 553 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 ICAM3P32942 547 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 RFC2P35250 354 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 PSEN2P49810 448 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 KRT32Q14532 448 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 HSDL1Q3SXM5 330 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 GNPTABQ3T906 1256 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 GDF6Q6KF10 455 aaPredicted RBP12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 USP17L6PQ6QN14 398 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms