RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 CST9Q5W186 159 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 PCNX4Q63HM2 1172 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 ANKRD23Q86SG2 305 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 PLA2G4DQ86XP0 818 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 ERMNQ8TAM6 284 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 NSUN6Q8TEA1 469 aaKnown RBP18.03■□□□□ 0.48
NUP54-214ENST00000514307 HAS1Q92839 578 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 RMDN3Q96TC7 470 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 MXRA8Q9BRK3 442 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 LRRC27Q9C0I9 530 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 GRPEL1Q9HAV7 217 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 MAGEF1Q9HAY2 307 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 MAFGO15525 162 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 MYL1P05976 194 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 TAL1P17542 331 aaPredicted RBP18.02■□□□□ 0.48
NUP54-214ENST00000514307 HUNKP57058 714 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 MDM2Q00987 491 aaPredicted RBP18.02■□□□□ 0.48
NUP54-214ENST00000514307 POSTNQ15063 836 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 STX1AQ16623 288 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 ANKRD35Q8N283 1001 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 TAAR1Q96RJ0 339 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 SPATC1LQ9H0A9 340 aa18.02■□□□□ 0.48
NUP54-214ENST00000514307 MYH15Q9Y2K3 1946 aa18.02■□□□□ 0.47
NUP54-214ENST00000514307 PFASO15067 1338 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 RPTORQ8N122 1335 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 CCL15-CCL14A0A0B4J2E2 113 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 FAM86B1E9PN63 330 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 ACTN4O43707 911 aaKnown RBP18.01■□□□□ 0.47
NUP54-214ENST00000514307 STAM2O75886 525 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 FAM86B2P0C5J1 330 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 BCRP11274 1271 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 GJA5P36382 358 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 GCLCP48506 637 aaPredicted RBP18.01■□□□□ 0.47
NUP54-214ENST00000514307 INHBEP58166 350 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 CCNA1P78396 465 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 SEMA3FQ13275 785 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 CCL15Q16663 113 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 SMARCE1Q969G3 411 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 PAGE5Q96GU1 130 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 MS4A4AQ96JQ5 239 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 MPHOSPH6Q99547 160 aaKnown RBP18.01■□□□□ 0.47
NUP54-214ENST00000514307 FUCA2Q9BTY2 467 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 NT5C3AQ9H0P0 336 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 MROH8Q9H579 483 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 DISC1Q9NRI5 854 aa18.01■□□□□ 0.47
NUP54-214ENST00000514307 CCND2P30279 289 aa18■□□□□ 0.47
NUP54-214ENST00000514307 NLRX1Q86UT6 975 aa18■□□□□ 0.47
NUP54-214ENST00000514307 NCAPG2Q86XI2 1143 aa18■□□□□ 0.47
NUP54-214ENST00000514307 DNERQ8NFT8 737 aa18■□□□□ 0.47
NUP54-214ENST00000514307 ETNPPLQ8TBG4 499 aa18■□□□□ 0.47
NUP54-214ENST00000514307 RIT2Q99578 217 aa18■□□□□ 0.47
NUP54-214ENST00000514307 PAGR1Q9BTK6 254 aa18■□□□□ 0.47
NUP54-214ENST00000514307 GTPBP4Q9BZE4 634 aaKnown RBP18■□□□□ 0.47
NUP54-214ENST00000514307 WDR11Q9BZH6 1224 aa18■□□□□ 0.47
NUP54-214ENST00000514307 JADE2Q9NQC1 790 aa18■□□□□ 0.47
NUP54-214ENST00000514307 PXMP2Q9NR77 195 aa18■□□□□ 0.47
NUP54-214ENST00000514307 CYP39A1Q9NYL5 469 aa18■□□□□ 0.47
NUP54-214ENST00000514307 BTBD7Q9P203 1132 aa18■□□□□ 0.47
NUP54-214ENST00000514307 RBPJLQ9UBG7 517 aa18■□□□□ 0.47
NUP54-214ENST00000514307 ADD3Q9UEY8 706 aaKnown RBP18■□□□□ 0.47
NUP54-214ENST00000514307 TUBE1Q9UJT0 475 aa18■□□□□ 0.47
NUP54-214ENST00000514307 IGLV3-22A0A075B6J6 115 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 PDHXO00330 501 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 MSH4O15457 936 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 CDC25AP30304 524 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 ZNF157P51786 506 aaPredicted RBP17.99■□□□□ 0.47
NUP54-214ENST00000514307 NLRP12P59046 1061 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 KARSQ15046 597 aaKnown RBP17.99■□□□□ 0.47
NUP54-214ENST00000514307 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 VSIG10LQ86VR7 867 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 TRIML1Q8N9V2 468 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 SMC1BQ8NDV3 1235 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 SHCBP1Q8NEM2 672 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 GPRC5AQ8NFJ5 357 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 CCDC47Q96A33 483 aaKnown RBP17.99■□□□□ 0.47
NUP54-214ENST00000514307 ZNF577Q9BSK1 485 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 RBSNQ9H1K0 784 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 STK17AQ9UEE5 414 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 UBIAD1Q9Y5Z9 338 aa17.99■□□□□ 0.47
NUP54-214ENST00000514307 KDM3AQ9Y4C1 1321 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 MANSC4A6NHS7 340 aaPredicted RBP17.98■□□□□ 0.47
NUP54-214ENST00000514307 GTPBP6O43824 516 aaPredicted RBP17.98■□□□□ 0.47
NUP54-214ENST00000514307 NR3C2P08235 984 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 MYCLP12524 364 aaPredicted RBP17.98■□□□□ 0.47
NUP54-214ENST00000514307 DEKP35659 375 aaKnown RBP17.98■□□□□ 0.47
NUP54-214ENST00000514307 UBXN2AP68543 259 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 PNOCQ13519 176 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 PGM5Q15124 567 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 E2F4Q16254 413 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 HAUS3Q68CZ6 603 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 SV2BQ7L1I2 683 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 SMCR8Q8TEV9 937 aaPredicted RBP17.98■□□□□ 0.47
NUP54-214ENST00000514307 SLC5A5Q92911 643 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 CCDC102AQ96A19 550 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 LENG9Q96B70 501 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 CDHR1Q96JP9 859 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 GSDMAQ96QA5 445 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms