RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 MC3RP41968 323 aa8.23□□□□□ -1.09
PDE4D-221ENST00000514231 CACNB2Q08289 660 aaPredicted RBP8.23□□□□□ -1.09
PDE4D-221ENST00000514231 LSAMPQ13449 338 aa8.23□□□□□ -1.09
PDE4D-221ENST00000514231 ZNF669Q96BR6 464 aaPredicted RBP8.23□□□□□ -1.09
PDE4D-221ENST00000514231 TMEM169Q96HH4 297 aa8.23□□□□□ -1.09
PDE4D-221ENST00000514231 H7BY64 318 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 HTRA3P83110 453 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 VMACQ2NL98 169 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 LCE4AQ5TA78 99 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 FNIP1Q8TF40 1166 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 IER2Q9BTL4 223 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 TANGO6Q9C0B7 1094 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 PCDHA2Q9Y5H9 948 aa8.22□□□□□ -1.09
PDE4D-221ENST00000514231 FFAR3O14843 346 aa8.21□□□□□ -1.1
PDE4D-221ENST00000514231 DLX3O60479 287 aa8.21□□□□□ -1.1
PDE4D-221ENST00000514231 SASH1O94885 1247 aa8.21□□□□□ -1.1
PDE4D-221ENST00000514231 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.1
PDE4D-221ENST00000514231 LCP1P13796 627 aa8.21□□□□□ -1.1
PDE4D-221ENST00000514231 FPR2P25090 351 aa8.21□□□□□ -1.1
PDE4D-221ENST00000514231 TP53I13Q8NBR0 393 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-221ENST00000514231 MSRB2Q9Y3D2 182 aa8.21□□□□□ -1.1
PDE4D-221ENST00000514231 PMF1-BGLAPU3KQ54 211 aa8.21□□□□□ -1.1
PDE4D-221ENST00000514231 U2SURPO15042 1029 aaKnown RBP8.2□□□□□ -1.1
PDE4D-221ENST00000514231 FGFR1P11362 822 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 HOXA5P20719 270 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 NBPF6Q5VWK0 638 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 LILRA6Q6PI73 481 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 RSPO2Q6UXX9 243 aaPredicted RBP8.2□□□□□ -1.1
PDE4D-221ENST00000514231 SAPCD2Q86UD0 394 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 NLRP10Q86W26 655 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 LRRC47Q8N1G4 583 aaKnown RBP8.2□□□□□ -1.1
PDE4D-221ENST00000514231 NBPF4Q96M43 638 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 AARSD1Q9BTE6 412 aaKnown RBP8.2□□□□□ -1.1
PDE4D-221ENST00000514231 PCDH18Q9HCL0 1135 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 LUC7LQ9NQ29 371 aaKnown RBP8.2□□□□□ -1.1
PDE4D-221ENST00000514231 GPR27Q9NS67 375 aa8.2□□□□□ -1.1
PDE4D-221ENST00000514231 COA3Q9Y2R0 106 aaPredicted RBP8.2□□□□□ -1.1
PDE4D-221ENST00000514231 VWA3BQ502W6 1294 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 MILR1Q7Z6M3 343 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 MIB1Q86YT6 1006 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 SP8Q8IXZ3 490 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 SMARCC2Q8TAQ2 1214 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 CHAMP1Q96JM3 812 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 CCDC113Q9H0I3 377 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 ARHGEF4Q9NR80 690 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 PPP1R1BQ9UD71 204 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-221ENST00000514231 FBXL7Q9UJT9 491 aa8.19□□□□□ -1.1
PDE4D-221ENST00000514231 SH3D21A4FU49 640 aa8.18□□□□□ -1.1
PDE4D-221ENST00000514231 CHRNA2Q15822 529 aa8.18□□□□□ -1.1
PDE4D-221ENST00000514231 ETV3LQ6ZN32 361 aa8.18□□□□□ -1.1
PDE4D-221ENST00000514231 ARMC5Q96C12 935 aa8.18□□□□□ -1.1
PDE4D-221ENST00000514231 C20orf173Q96LM9 149 aa8.18□□□□□ -1.1
PDE4D-221ENST00000514231 XYLT2Q9H1B5 865 aa8.18□□□□□ -1.1
PDE4D-221ENST00000514231 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
PDE4D-221ENST00000514231 ADAMTS20P59510 1910 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 HGSO14964 777 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-221ENST00000514231 PDPK1O15530 556 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 PRODHO43272 600 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 PABPC1P11940 636 aaKnown RBP8.17□□□□□ -1.1
PDE4D-221ENST00000514231 NSMFQ6X4W1 530 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 DCAF4Q8WV16 495 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 HIRIP3Q9BW71 556 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-221ENST00000514231 KRTAP4-9Q9BYQ8 210 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 CLDND1Q9NY35 253 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 SIRPGQ9P1W8 387 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 ZNF652Q9Y2D9 606 aa8.17□□□□□ -1.1
PDE4D-221ENST00000514231 TRAV20A0A0B4J274 112 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 TADA3O75528 432 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 CYP2C8P10632 490 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 CTSWP56202 376 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 DLX2Q07687 328 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-221ENST00000514231 RBL2Q08999 1139 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 RASGRF1Q13972 1273 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 USP53Q70EK8 1073 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-221ENST00000514231 OSBP2Q969R2 916 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 NOX5Q96PH1 765 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 SPATA9Q9BWV2 254 aa8.16□□□□□ -1.1
PDE4D-221ENST00000514231 NGRNQ9NPE2 291 aaKnown RBP8.16□□□□□ -1.1
PDE4D-221ENST00000514231 DGKIO75912 1065 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 KCNC1P48547 511 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 SLURP1P55000 103 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 EMC4Q5J8M3 183 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 LIPIQ6XZB0 460 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 FAM126BQ8IXS8 530 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.15□□□□□ -1.1
PDE4D-221ENST00000514231 DDX11Q96FC9 970 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 ZFYVE21Q9BQ24 234 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 EPB41L1Q9H4G0 881 aa8.15□□□□□ -1.1
PDE4D-221ENST00000514231 OTOL1A6NHN0 477 aaPredicted RBP8.14□□□□□ -1.11
PDE4D-221ENST00000514231 MSCO60682 206 aa8.14□□□□□ -1.11
PDE4D-221ENST00000514231 C8BP07358 591 aa8.14□□□□□ -1.11
PDE4D-221ENST00000514231 GTF2F1P35269 517 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDE4D-221ENST00000514231 STEAP3Q658P3 488 aa8.14□□□□□ -1.11
PDE4D-221ENST00000514231 CD300LDQ6UXZ3 194 aa8.14□□□□□ -1.11
PDE4D-221ENST00000514231 SPATC1Q76KD6 591 aa8.14□□□□□ -1.11
PDE4D-221ENST00000514231 ZC3H18Q86VM9 953 aaKnown RBP8.14□□□□□ -1.11
PDE4D-221ENST00000514231 PHF20Q9BVI0 1012 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 335.7 ms