RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 SH2D3AQ9BRG2 576 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 MYO1CO00159 1063 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 ADCY8P40145 1251 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
PRDM16-208ENST00000514189 NNTQ13423 1086 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 BHMT2Q9H2M3 363 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 PCDHA13Q9Y5I0 950 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 STX2P32856 288 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 MAN2A1Q16706 1144 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 XKR9Q5GH70 373 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 CYP4F22Q6NT55 531 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 CACNA2D3Q8IZS8 1091 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 DHTKD1Q96HY7 919 aaPredicted RBP14.3□□□□□ -0.12
PRDM16-208ENST00000514189 EMILIN3Q9NT22 766 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 KIF13AQ9H1H9 1805 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
PRDM16-208ENST00000514189 DHX9Q08211 1270 aaKnown RBP14.3□□□□□ -0.12
PRDM16-208ENST00000514189 MICAL1Q8TDZ2 1067 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 PANX2Q96RD6 677 aa14.3□□□□□ -0.12
PRDM16-208ENST00000514189 ANKARQ7Z5J8 1434 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 E9PMD0 336 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 HSPA1LP34931 641 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 KIFAP3Q92845 792 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 SMC6Q96SB8 1091 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 SERPINB13Q9UIV8 391 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 RIMS1Q86UR5 1692 aaKnown RBP14.29□□□□□ -0.12
PRDM16-208ENST00000514189 USP17L5A8MUK1 530 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 OTUD6AQ7L8S5 288 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 FMNL3Q8IVF7 1028 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 DDX12PQ92771 950 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 TMEM47Q9BQJ4 181 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 MLXIPLQ9NP71 852 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 NOVA2Q9UNW9 492 aaKnown RBP14.29□□□□□ -0.12
PRDM16-208ENST00000514189 MROH7-TTC4A0A0A0MT08 1334 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 TRIM66O15016 1216 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 CDK8P49336 464 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 TRIM68Q6AZZ1 485 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 RAD9BQ6WBX8 426 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 DCP1AQ9NPI6 582 aaPredicted RBP14.29□□□□□ -0.12
PRDM16-208ENST00000514189 TXNDC16Q9P2K2 825 aa14.29□□□□□ -0.12
PRDM16-208ENST00000514189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 GOLGA8IPA6NC78 632 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 POC1B-GALNT4F8VUJ3 575 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 PPIP5K2O43314 1243 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 ATP1A1P05023 1023 aaKnown RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 GGCXP38435 758 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TRAPPC10P48553 1259 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 SESN3P58005 492 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 POTEDQ86YR6 584 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 CEP63Q96MT8 703 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 MINPP1Q9UNW1 487 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 RABGAP1Q9Y3P9 1069 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 ZSCAN20P17040 1043 aaPredicted RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TMOD1P28289 359 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TRPC3Q13507 836 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 HHATQ5VTY9 493 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 BRINP3Q76B58 766 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 MIGA2Q7L4E1 593 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 MAK16Q9BXY0 300 aaKnown RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 AGPAT5Q9NUQ2 364 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TTLL3Q9Y4R7 772 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 LRRC53A6NM62 1247 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TFRCP02786 760 aaKnown RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 ARHGAP25P42331 645 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 CTTNQ14247 550 aaKnown RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 ALKBH5Q6P6C2 394 aaKnown RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 SRBD1Q8N5C6 995 aaKnown RBP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRDM16-208ENST00000514189 TSKSQ9UJT2 592 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 JRKLQ9Y4A0 524 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 COL4A3BPQ9Y5P4 624 aa14.28□□□□□ -0.12
PRDM16-208ENST00000514189 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.12
PRDM16-208ENST00000514189 TADA3O75528 432 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 DLGAP5Q15398 846 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 TSGA10IPQ3SY00 556 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 GKAP1Q5VSY0 366 aaPredicted RBP14.27□□□□□ -0.12
PRDM16-208ENST00000514189 CASC4Q6P4E1 433 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.27□□□□□ -0.12
PRDM16-208ENST00000514189 RETREG2Q8NC44 543 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 CCDC97Q96F63 343 aaPredicted RBP14.27□□□□□ -0.12
PRDM16-208ENST00000514189 IFT74Q96LB3 600 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.27□□□□□ -0.121e-6■■■■■ 31.8
PRDM16-208ENST00000514189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.12
PRDM16-208ENST00000514189 ALDH3A1P30838 453 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 PSMD6Q15008 389 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 PDIA6Q15084 440 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 SYCE1Q8N0S2 351 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 ZNF526Q8TF50 670 aaPredicted RBP14.27□□□□□ -0.12
PRDM16-208ENST00000514189 EXOC4Q96A65 974 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.12
PRDM16-208ENST00000514189 USP21Q9UK80 565 aa14.27□□□□□ -0.12
PRDM16-208ENST00000514189 ADGRB1O14514 1584 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms