RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
CLDND1-229ENST00000513988 UPP2O95045 317 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 GLP2RO95838 553 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 MMP1P03956 469 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 NBPF7P0C2Y1 421 aaPredicted RBP9.3□□□□□ -0.92
CLDND1-229ENST00000513988 ARP10275 920 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 BMPR1AP36894 532 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 NRIP1P48552 1158 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 PTGISQ16647 500 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 PRR23BQ6ZRT6 265 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 TBC1D9Q6ZT07 1266 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 ADGRD2Q7Z7M1 963 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 ANKRD35Q8N283 1001 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 FIBCD1Q8N539 461 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 FBXO28Q9NVF7 368 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 RWDD3Q9Y3V2 267 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 SCN10AQ9Y5Y9 1956 aa9.3□□□□□ -0.92
CLDND1-229ENST00000513988 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 TAF4O00268 1085 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 SP9P0CG40 484 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 NPR3P17342 541 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 CPT1AP50416 773 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 IQSEC1Q6DN90 963 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 SLC4A10Q6U841 1118 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 UNQ6494/PRO21346Q6UXR6 183 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 ATG9AQ7Z3C6 839 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 RBM23Q86U06 439 aaKnown RBP9.29□□□□□ -0.92
CLDND1-229ENST00000513988 FAM133AQ8N9E0 248 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 REPS2Q8NFH8 660 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 EHD4Q9H223 541 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 SH2D4AQ9H788 454 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 PPP1R9AQ9ULJ8 1098 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 CACNA1FO60840 1977 aa9.29□□□□□ -0.92
CLDND1-229ENST00000513988 SLC30A4O14863 429 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 LGR5O75473 907 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 CKBP12277 381 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 SHMT1P34896 483 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 CHMP4BP1P59074 171 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 PPP4CP60510 307 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 NETO1Q8TDF5 533 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 TSR2Q969E8 191 aaKnown RBP9.28□□□□□ -0.92
CLDND1-229ENST00000513988 VCPKMTQ9H867 229 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 PDGFCQ9NRA1 345 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 LRP2BPQ9P2M1 347 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 RIPK3Q9Y572 518 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 MYH1P12882 1939 aa9.28□□□□□ -0.92
CLDND1-229ENST00000513988 IGSF10Q6WRI0 2623 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 ASB14A6NK59 587 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 ASGR2P07307 311 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 C1QTNF9P0C862 333 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 BRDTQ58F21 947 aaPredicted RBP9.27□□□□□ -0.93
CLDND1-229ENST00000513988 TMEM63BQ5T3F8 832 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 NAA16Q6N069 864 aaPredicted RBP9.27□□□□□ -0.93
CLDND1-229ENST00000513988 TTC6Q86TZ1 520 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 KDF1Q8NAX2 398 aaPredicted RBP9.27□□□□□ -0.93
CLDND1-229ENST00000513988 TOP1MTQ969P6 601 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 IL17RAQ96F46 866 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 NEK1Q96PY6 1258 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 IFIH1Q9BYX4 1025 aaKnown RBP9.27□□□□□ -0.93
CLDND1-229ENST00000513988 ARHGEF10LQ9HCE6 1279 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 ANKFY1Q9P2R3 1169 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 FBXL21Q9UKT6 434 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 MYO18BQ8IUG5 2567 aa9.27□□□□□ -0.93
CLDND1-229ENST00000513988 C2CD4DB7Z1M9 353 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 RFX1P22670 979 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 CNTN2Q02246 1040 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 RBL2Q08999 1139 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 CAMK1Q14012 370 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 N4BP2L1Q5TBK1 243 aaPredicted RBP9.26□□□□□ -0.93
CLDND1-229ENST00000513988 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 KIAA1211Q6ZU35 1233 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 EEPD1Q7L9B9 569 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 FBXO16Q8IX29 292 aaPredicted RBP9.26□□□□□ -0.93
CLDND1-229ENST00000513988 SIX5Q8N196 739 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 SPATA5Q8NB90 893 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 DBF4BQ8NFT6 615 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 PTCD2Q8WV60 388 aaKnown RBP9.26□□□□□ -0.93
CLDND1-229ENST00000513988 DDX1Q92499 740 aaKnown RBP9.26□□□□□ -0.93
CLDND1-229ENST00000513988 DHX38Q92620 1227 aaKnown RBP9.26□□□□□ -0.93
CLDND1-229ENST00000513988 TLE6Q9H808 572 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 ERVK-5Q9HDB9 667 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 HMG20BQ9P0W2 317 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 FBXO40Q9UH90 709 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 TMX2Q9Y320 296 aa9.26□□□□□ -0.93
CLDND1-229ENST00000513988 SMG1Q96Q15 3661 aaKnown RBP9.26□□□□□ -0.93
CLDND1-229ENST00000513988 SRRM3A6NNA2 597 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-229ENST00000513988 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 USP17L21D6R901 530 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 RBAK-RBAKDNI3L0D1 243 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 SPTLC1O15269 473 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 KPNA6O60684 536 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 USP5P45974 858 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 RFX5P48382 616 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-229ENST00000513988 RBM25P49756 843 aaKnown RBP9.25□□□□□ -0.93
CLDND1-229ENST00000513988 MVPQ14764 893 aaKnown RBP9.25□□□□□ -0.93
CLDND1-229ENST00000513988 DUSP28Q4G0W2 176 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 SOWAHCQ53LP3 525 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms