RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 CSF2RAP15509 400 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 MCM5P33992 734 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
CDK7-208ENST00000512687 ARHGAP1Q07960 439 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 STXBP2Q15833 593 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 MFSD5Q6N075 450 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
CDK7-208ENST00000512687 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
CDK7-208ENST00000512687 MAP3K14Q99558 947 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDK7-208ENST00000512687 PDCD2LQ9BRP1 358 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 MTA3Q9BTC8 594 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
CDK7-208ENST00000512687 ALDH8A1Q9H2A2 487 aaPredicted RBP13.94□□□□□ -0.18
CDK7-208ENST00000512687 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
CDK7-208ENST00000512687 CDC45O75419 566 aa13.93□□□□□ -0.18
CDK7-208ENST00000512687 PGM5Q15124 567 aa13.93□□□□□ -0.18
CDK7-208ENST00000512687 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
CDK7-208ENST00000512687 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
CDK7-208ENST00000512687 AFG1LQ8WV93 481 aa13.93□□□□□ -0.18
CDK7-208ENST00000512687 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
CDK7-208ENST00000512687 TMEM87BQ96K49 555 aa13.93□□□□□ -0.18
CDK7-208ENST00000512687 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
CDK7-208ENST00000512687 NOC4LQ9BVI4 516 aaKnown RBP13.93□□□□□ -0.18
CDK7-208ENST00000512687 WNT8AQ9H1J5 351 aa13.93□□□□□ -0.18
CDK7-208ENST00000512687 TRMT13Q9NUP7 481 aaKnown RBP13.93□□□□□ -0.18
CDK7-208ENST00000512687 EYSQ5T1H1 3165 aa13.93□□□□□ -0.18
CDK7-208ENST00000512687 FRMPD4Q14CM0 1322 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 GH1P01241 217 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 MMP3P08254 477 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 ACRP10323 421 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 MYCLP12524 364 aaPredicted RBP13.92□□□□□ -0.18
CDK7-208ENST00000512687 LIFRP42702 1097 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 PPIGQ13427 754 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDK7-208ENST00000512687 NBPF20Q3BBV1 942 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 ADCK5Q3MIX3 580 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 TMEM240Q5SV17 173 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 FAM109BQ6ICB4 259 aaPredicted RBP13.92□□□□□ -0.18
CDK7-208ENST00000512687 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 CTCFLQ8NI51 663 aaPredicted RBP13.92□□□□□ -0.18
CDK7-208ENST00000512687 GPKOWQ92917 476 aaPredicted RBP eCLIP13.92□□□□□ -0.18
CDK7-208ENST00000512687 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 FAM161BQ96MY7 647 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 GUCD1Q96NT3 240 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 HIPK3Q9H422 1215 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
CDK7-208ENST00000512687 SIP14410 1827 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 MYO9BQ13459 2157 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 WDR81Q562E7 1941 aa13.92□□□□□ -0.18
CDK7-208ENST00000512687 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 GCOM1H8Y6P7 765 aaPredicted RBP13.91□□□□□ -0.18
CDK7-208ENST00000512687 EIF3JO75822 258 aaKnown RBP13.91□□□□□ -0.18
CDK7-208ENST00000512687 POLR2MP0CAP2 368 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 CYP2C9P11712 490 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 CCL23P55773 120 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 SMAD3P84022 425 aaKnown RBP13.91□□□□□ -0.18
CDK7-208ENST00000512687 FCHSD1Q86WN1 690 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 KAT2BQ92831 832 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 RNF25Q96BH1 459 aaPredicted RBP13.91□□□□□ -0.18
CDK7-208ENST00000512687 SEZ6LQ9BYH1 1024 aa13.91□□□□□ -0.18
CDK7-208ENST00000512687 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
CDK7-208ENST00000512687 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
CDK7-208ENST00000512687 hCG_1642624A0A1W2PR95 340 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 SORBS3O60504 671 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 KIF5BP33176 963 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 FAM47CQ5HY64 1035 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 ZNF365Q70YC5 407 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 VSIG10LQ86VR7 867 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 MICU3Q86XE3 530 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 TMEM199Q8N511 208 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
CDK7-208ENST00000512687 SCLYQ96I15 445 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
CDK7-208ENST00000512687 MRVI1Q9Y6F6 885 aa13.9□□□□□ -0.18
CDK7-208ENST00000512687 RBAK-RBAKDNI3L0D1 243 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 KPNA6O60684 536 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 ZNF286BP0CG31 522 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 SMARCA1P28370 1054 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 CCND2P30279 289 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 MRPS9P82933 396 aaKnown RBP13.89□□□□□ -0.19
CDK7-208ENST00000512687 EXOSC10Q01780 885 aaKnown RBP13.89□□□□□ -0.19
CDK7-208ENST00000512687 SP2Q02086 613 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 BRDTQ58F21 947 aaPredicted RBP13.89□□□□□ -0.19
CDK7-208ENST00000512687 NFRKBQ6P4R8 1299 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 TMTC2Q8N394 836 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
CDK7-208ENST00000512687 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 CTAGE1Q96RT6 745 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 BCAS3Q9H6U6 928 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 IL23AQ9NPF7 189 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 SLC12A7Q9Y666 1083 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms