RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
MSH3-203ENST00000512531 MYH6P13533 1939 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 ROBO3Q96MS0 1386 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 COL2A1P02458 1487 aaPredicted RBP10.76□□□□□ -0.69
MSH3-203ENST00000512531 RANBP2P49792 3224 aaKnown RBP10.76□□□□□ -0.69
MSH3-203ENST00000512531 FLT3LGP49771 235 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 NLRP5P59047 1200 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 PDE4CQ08493 712 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 FAM110CQ1W6H9 321 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 TMTC3Q6ZXV5 915 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 LUZP1Q86V48 1076 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 ZFPM1Q8IX07 1006 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 TEX11Q8IYF3 940 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 ANKLE1Q8NAG6 615 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 PIBF1Q8WXW3 757 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 COA7Q96BR5 231 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 UNC93B1Q9H1C4 597 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 GABRQQ9UN88 632 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 SLC27A5Q9Y2P5 690 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
MSH3-203ENST00000512531 GPR75-ASB3A0A0A6YYF3 556 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 KIF28PB7ZC32 967 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 hCG_1984214I3L0E3 225 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 TNPO2O14787 897 aaKnown RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 IKBKBO14920 756 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 CCP110O43303 1012 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 DTNBO60941 627 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 PPFIA3O75145 1194 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 SCG2P13521 617 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 SMARCA1P28370 1054 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 MARCKSP29966 332 aaPredicted RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 GCLCP48506 637 aaPredicted RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 ZNF75DP51815 510 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 TFAP4Q01664 338 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 PABPC4Q13310 644 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSH3-203ENST00000512531 RNF19BQ6ZMZ0 732 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 SH3BP5LQ7L8J4 393 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 ZNF713Q8N859 430 aaPredicted RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 SMCR8Q8TEV9 937 aaPredicted RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 GTPBP4Q9BZE4 634 aaKnown RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 OSBPL5Q9H0X9 879 aaPredicted RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 GOLPH3LQ9H4A5 285 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 VRTNQ9H8Y1 702 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 IMPACTQ9P2X3 320 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 SEC63Q9UGP8 760 aaKnown RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 SWAP70Q9UH65 585 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 ZMIZ1Q9ULJ6 1067 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 SRPRBQ9Y5M8 271 aaKnown RBP10.75□□□□□ -0.69
MSH3-203ENST00000512531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSH3-203ENST00000512531 PTPRFP10586 1907 aa10.75□□□□□ -0.69
MSH3-203ENST00000512531 NAV1Q8NEY1 1877 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 BAZ2AQ9UIF9 1905 aaKnown RBP10.74□□□□□ -0.69
MSH3-203ENST00000512531 MYH2Q9UKX2 1941 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 DDTLA6NHG4 134 aaPredicted RBP10.74□□□□□ -0.69
MSH3-203ENST00000512531 BTBD18B2RXH4 712 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 INHAP05111 366 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 HLA-DOAP06340 250 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 FBXO45P0C2W1 286 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 BMP8BP34820 402 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 SOX11P35716 441 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 BTDP43251 543 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 TROAPQ12815 778 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 PTPAQ15257 358 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 PFKFB3Q16875 520 aaPredicted RBP10.74□□□□□ -0.69
MSH3-203ENST00000512531 AXDND1Q5T1B0 1012 aaPredicted RBP10.74□□□□□ -0.69
MSH3-203ENST00000512531 GADL1Q6ZQY3 521 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 RETREG3Q86VR2 466 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 ZSCAN29Q8IWY8 852 aaPredicted RBP10.74□□□□□ -0.69
MSH3-203ENST00000512531 PNMA1Q8ND90 353 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 TGFBRAP1Q8WUH2 860 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 SMARCE1Q969G3 411 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 PHF20Q9BVI0 1012 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 FTOQ9C0B1 505 aaKnown RBP eCLIP10.74□□□□□ -0.69
MSH3-203ENST00000512531 INCENPQ9NQS7 918 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 V9GY48 417 aaPredicted RBP10.74□□□□□ -0.69
MSH3-203ENST00000512531 DOCK1Q14185 1865 aa10.74□□□□□ -0.69
MSH3-203ENST00000512531 SZT2Q5T011 3432 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 PHIPQ8WWQ0 1821 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 CCDC194A0A1B0GVG4 234 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
MSH3-203ENST00000512531 LAD1O00515 517 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 ATP9BO43861 1147 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 PRDM1O75626 825 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 TFRCP02786 760 aaKnown RBP10.73□□□□□ -0.69
MSH3-203ENST00000512531 GNA11P29992 359 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 RHBDL3P58872 404 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 ORC2Q13416 577 aaPredicted RBP10.73□□□□□ -0.69
MSH3-203ENST00000512531 GRM4Q14833 912 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 BLOC1S3Q6QNY0 202 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 KRBA2Q6ZNG9 492 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 NECAB2Q7Z6G3 386 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 PLA2G4DQ86XP0 818 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 MLKLQ8NB16 471 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 CCDC150Q8NCX0 1101 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 CCDC47Q96A33 483 aaKnown RBP10.73□□□□□ -0.69
MSH3-203ENST00000512531 PRIMPOLQ96LW4 560 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms