RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SH3BP5LQ7L8J4 393 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 USP7Q93009 1102 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 TRIM63Q969Q1 353 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 RRP36Q96EU6 259 aaKnown RBP7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 IFT43Q96FT9 208 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 IFT22Q9H7X7 185 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 GRPEL1Q9HAV7 217 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 AASSQ9UDR5 926 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 BCS1LQ9Y276 419 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 PCDHB5Q9Y5E4 795 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 CLASP1Q7Z460 1538 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 CCDC18Q5T9S5 1454 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 BPIP17213 487 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 ADCYAP1R1P41586 468 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 NLRP12P59046 1061 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 PDCD2Q16342 344 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 SETMARQ53H47 684 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 OVCH2Q7RTZ1 564 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 C1orf162Q8NEQ5 155 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 CEP95Q96GE4 821 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 SLC52A2Q9HAB3 445 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 MTRRQ9UBK8 725 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 GIT1Q9Y2X7 761 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 SPEF1Q9Y4P9 236 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 A6NLC8 198 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 DKC1O60832 514 aaKnown RBP eCLIP7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 GSTT1P30711 240 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 PRPHP41219 470 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 PAPOLAP51003 745 aaKnown RBP7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 CALD1Q05682 793 aaKnown RBP7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 COX10Q12887 443 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 TTC39AQ5SRH9 613 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 HAUS3Q68CZ6 603 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 PGM2L1Q6PCE3 622 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 OTUD6AQ7L8S5 288 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 GALNTL5Q7Z4T8 443 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 FAM43AQ8N2R8 423 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 CCDC191Q8NCU4 936 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 HPS3Q969F9 1004 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 ASIC4Q96FT7 647 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 STK31Q9BXU1 1019 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 TEX13BQ9BXU2 312 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 SRCIN1Q9C0H9 1055 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 PLSCR4Q9NRQ2 329 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 C2CD2Q9Y426 696 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 PRG4Q92954 1404 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 RAPGEF6Q8TEU7 1601 aa7.13□□□□□ -1.27
TRAPPC11-209ENST00000512476 LINC00854A0A1B0GVQ3 168 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 A0A1W2PPH5 198 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 MUSKO15146 869 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 KIF1CO43896 1103 aaKnown RBP7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 FOXK2Q01167 660 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 SURF1Q15526 300 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 KIAA0753Q2KHM9 967 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 CFAP58Q5T655 872 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 RASIP1Q5U651 963 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 EPHX4Q8IUS5 362 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 PCYOX1LQ8NBM8 494 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 SLC30A5Q8TAD4 765 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 RILPL2Q969X0 211 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 FAXDC2Q96IV6 333 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 MOGAT1Q96PD6 335 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 MPHOSPH8Q99549 860 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 CDC6Q99741 560 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 C7orf25Q9BPX7 421 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 KCTD10Q9H3F6 313 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 UBN1Q9NPG3 1134 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 EPRSP07814 1512 aaKnown RBP7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 POTECB2RU33 542 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 EREGO14944 169 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 AOC2O75106 756 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 GJB3O75712 270 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 KRT1P04264 644 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 CYP17A1P05093 508 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 TNFSF4P23510 183 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 HOXD10P28358 340 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 ABCD1P33897 745 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 LIMK1P53667 647 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 SPARCL1Q14515 664 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 RABL6Q3YEC7 729 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 TMEM151BQ8IW70 566 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 MIGA1Q8NAN2 632 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 C1orf74Q96LT6 269 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 SORBS1Q9BX66 1292 aaKnown RBP7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 SLC7A5P2Q9GIP4 190 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 TRIT1Q9H3H1 467 aaKnown RBP7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 NMRK2Q9NPI5 230 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 C14orf119Q9NWQ9 140 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 TBC1D29Q9UFV1 150 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 ATP6V0A2Q9Y487 856 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 PCDHGB2Q9Y5G2 931 aa7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 EPN1Q9Y6I3 576 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 RRBP1Q9P2E9 1410 aaKnown RBP7.12□□□□□ -1.27
TRAPPC11-209ENST00000512476 BTBD11A6QL63 1104 aa7.11□□□□□ -1.27
TRAPPC11-209ENST00000512476 SUSD5O60279 629 aa7.11□□□□□ -1.27
TRAPPC11-209ENST00000512476 DGKIO75912 1065 aa7.11□□□□□ -1.27
TRAPPC11-209ENST00000512476 DESP17661 470 aa7.11□□□□□ -1.27
TRAPPC11-209ENST00000512476 ELF1P32519 619 aa7.11□□□□□ -1.27
TRAPPC11-209ENST00000512476 ANP32AP39687 249 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms