RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CCDC155Q8N6L0 562 aa22.43■■□□□ 1.18
HMGCS1-206ENST00000511774 DNERQ8NFT8 737 aa22.43■■□□□ 1.18
HMGCS1-206ENST00000511774 NEK9Q8TD19 979 aa22.43■■□□□ 1.18
HMGCS1-206ENST00000511774 OTUD7AQ8TE49 926 aaPredicted RBP22.43■■□□□ 1.18
HMGCS1-206ENST00000511774 TBC1D5Q92609 795 aa22.43■■□□□ 1.18
HMGCS1-206ENST00000511774 HDAC6Q9UBN7 1215 aa22.43■■□□□ 1.18
HMGCS1-206ENST00000511774 MYH7BA7E2Y1 1941 aa22.43■■□□□ 1.18
HMGCS1-206ENST00000511774 ABHD14A-ACY1A0A1B0GW23 586 aa22.42■■□□□ 1.18
HMGCS1-206ENST00000511774 ZNF200P98182 395 aaPredicted RBP22.42■■□□□ 1.18
HMGCS1-206ENST00000511774 HIC1Q14526 733 aa22.42■■□□□ 1.18
HMGCS1-206ENST00000511774 PI4K2BQ8TCG2 481 aa22.42■■□□□ 1.18
HMGCS1-206ENST00000511774 FBXL18Q96ME1 805 aa22.42■■□□□ 1.18
HMGCS1-206ENST00000511774 GTF2IRD1Q9UHL9 959 aa22.42■■□□□ 1.18
HMGCS1-206ENST00000511774 POTEB3A0JP26 581 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 ORC4O43929 436 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 FGRP09769 529 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 PDHBP11177 359 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 ZNF618Q5T7W0 954 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 POTEBQ6S5H4 581 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 CHST3Q7LGC8 479 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 FBXO22Q8NEZ5 403 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 COL20A1Q9P218 1284 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 ANAPC4Q9UJX5 808 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 USP34Q70CQ2 3546 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 NLRC5Q86WI3 1866 aa22.41■■□□□ 1.18
HMGCS1-206ENST00000511774 GPATCH3Q96I76 525 aa22.4■■□□□ 1.18
HMGCS1-206ENST00000511774 CPVLQ9H3G5 476 aa22.4■■□□□ 1.18
HMGCS1-206ENST00000511774 DCTPP1Q9H773 170 aa22.4■■□□□ 1.18
HMGCS1-206ENST00000511774 TECTAO75443 2155 aa22.39■■□□□ 1.18
HMGCS1-206ENST00000511774 WDR19Q8NEZ3 1342 aa22.39■■□□□ 1.18
HMGCS1-206ENST00000511774 TOP1P11387 765 aaKnown RBP22.39■■□□□ 1.17
HMGCS1-206ENST00000511774 ALADP13716 330 aa22.39■■□□□ 1.17
HMGCS1-206ENST00000511774 SEPT14Q6ZU15 432 aa22.39■■□□□ 1.17
HMGCS1-206ENST00000511774 TAAR1Q96RJ0 339 aa22.39■■□□□ 1.17
HMGCS1-206ENST00000511774 ALG1Q9BT22 464 aa22.39■■□□□ 1.17
HMGCS1-206ENST00000511774 FSD1Q9BTV5 496 aa22.39■■□□□ 1.17
HMGCS1-206ENST00000511774 OSBPL7Q9BZF2 842 aa22.39■■□□□ 1.17
HMGCS1-206ENST00000511774 DCXO43602 365 aa22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 GH1P01241 217 aa22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 PSEN2P49810 448 aa22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 HTRA4P83105 476 aaPredicted RBP22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 ZNF543Q08ER8 600 aa22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 IKBKEQ14164 716 aa22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 USH1GQ495M9 461 aa22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 SP7Q8TDD2 431 aaPredicted RBP22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 MRPL38Q96DV4 380 aaKnown RBP22.38■■□□□ 1.17
HMGCS1-206ENST00000511774 HAS3O00219 553 aa22.37■■□□□ 1.17
HMGCS1-206ENST00000511774 ZNF286BP0CG31 522 aa22.37■■□□□ 1.17
HMGCS1-206ENST00000511774 ZP2Q05996 745 aa22.37■■□□□ 1.17
HMGCS1-206ENST00000511774 PARNO95453 639 aaKnown RBP22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 SNHG28P0DPA3 235 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 PTK7Q13308 1070 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 COL19A1Q14993 1142 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 EPC2Q52LR7 807 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 TCEAL5Q5H9L2 206 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 HFE2Q6ZVN8 426 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 DBF4BQ8NFT6 615 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 CRBNQ96SW2 442 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 INSL6Q9Y581 213 aa22.36■■□□□ 1.17
HMGCS1-206ENST00000511774 C19orf67A6NJJ6 358 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 LGR5O75473 907 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 F2P00734 622 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 CASTP20810 708 aaKnown RBP22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 MFSD10Q14728 455 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 CSPP1Q1MSJ5 1256 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 RRP12Q5JTH9 1297 aaKnown RBP22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 MYOCDQ8IZQ8 938 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 C7orf31Q8N865 590 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 SYTL5Q8TDW5 730 aaPredicted RBP22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 PHOX2BQ99453 314 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 MPHOSPH6Q99547 160 aaKnown RBP22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 TCP11L1Q9NUJ3 509 aa22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 DDX41Q9UJV9 622 aaKnown RBP22.35■■□□□ 1.17
HMGCS1-206ENST00000511774 TTC41PQ6P2S7 1318 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 MYH6P13533 1939 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 EFCAB14O75071 495 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 GOLGA8HP0CJ92 632 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 DGKDQ16760 1214 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 KIAA0753Q2KHM9 967 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 UBA5Q9GZZ9 404 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 TOMM22Q9NS69 142 aa22.34■■□□□ 1.17
HMGCS1-206ENST00000511774 LTBRP36941 435 aa22.33■■□□□ 1.17
HMGCS1-206ENST00000511774 BANK1Q8NDB2 785 aa22.33■■□□□ 1.17
HMGCS1-206ENST00000511774 PABPC5Q96DU9 382 aaKnown RBP22.33■■□□□ 1.17
HMGCS1-206ENST00000511774 CHMP4BQ9H444 224 aaKnown RBP22.33■■□□□ 1.17
HMGCS1-206ENST00000511774 CFAP54Q96N23 3096 aa22.33■■□□□ 1.16
HMGCS1-206ENST00000511774 H3BNC9 293 aa22.32■■□□□ 1.16
HMGCS1-206ENST00000511774 IRS1P35568 1242 aa22.32■■□□□ 1.16
HMGCS1-206ENST00000511774 ALX1Q15699 326 aa22.32■■□□□ 1.16
HMGCS1-206ENST00000511774 PUS10Q3MIT2 529 aaKnown RBP22.32■■□□□ 1.16
HMGCS1-206ENST00000511774 EMID1Q96A84 441 aaPredicted RBP22.32■■□□□ 1.16
HMGCS1-206ENST00000511774 RALGAPA2Q2PPJ7 1873 aa22.32■■□□□ 1.16
HMGCS1-206ENST00000511774 ZDBF2Q9HCK1 2354 aa22.32■■□□□ 1.16
HMGCS1-206ENST00000511774 SORBS3O60504 671 aa22.31■■□□□ 1.16
HMGCS1-206ENST00000511774 FGAP02671 866 aa22.31■■□□□ 1.16
HMGCS1-206ENST00000511774 HOXD8P13378 290 aaPredicted RBP22.31■■□□□ 1.16
HMGCS1-206ENST00000511774 GPM6BQ13491 265 aa22.31■■□□□ 1.16
HMGCS1-206ENST00000511774 TIGD5Q53EQ6 642 aa22.31■■□□□ 1.16
HMGCS1-206ENST00000511774 PLEKHG4Q58EX7 1191 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms