RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 SPDYE5A6NIY4 337 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 VCAM1P19320 739 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 FECHP22830 423 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 ADKP55263 362 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 SEMA3FQ13275 785 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 SYDE2Q5VT97 1194 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 BTNL9Q6UXG8 535 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 TOGARAM2Q6ZUX3 1019 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 RWDD2AQ9UIY3 292 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 UNCXA6NJT0 531 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 KIF3CO14782 793 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 FANCGO15287 622 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 CCDC175P0C221 793 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 TXLNAP40222 546 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 BMS1Q14692 1282 aaKnown RBP18■□□□□ 0.47
SQSTM1-213ENST00000510187 ARHGAP29Q52LW3 1261 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 GALNT17Q6IS24 598 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 PIK3AP1Q6ZUJ8 805 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 HEATR3Q7Z4Q2 680 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 CNGA4Q8IV77 575 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 IGSF22Q8N9C0 903 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 CHURC1Q8WUH1 139 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 GPKOWQ92917 476 aaPredicted RBP eCLIP18■□□□□ 0.47
SQSTM1-213ENST00000510187 SLC10A4Q96EP9 437 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 TMOD4Q9NZQ9 345 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 LIMA1Q9UHB6 759 aaKnown RBP18■□□□□ 0.47
SQSTM1-213ENST00000510187 FEM1BQ9UK73 627 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 PHIPQ8WWQ0 1821 aa18■□□□□ 0.47
SQSTM1-213ENST00000510187 IRF6O14896 467 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 GNG11P61952 73 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 FAM193AP78312 1265 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 PTPN21Q16825 1174 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 CST9Q5W186 159 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 KLHL10Q6JEL2 608 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 DAGLBQ8NCG7 672 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 LRRN4CLQ8ND94 238 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 OPTNQ96CV9 577 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 C12orf42Q96LP6 360 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 TANGO6Q9C0B7 1094 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 PRR12Q9ULL5 1215 aa17.99■□□□□ 0.47
SQSTM1-213ENST00000510187 PNMA6FA0A0J9YX94 578 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 LRRC10BA6NIK2 292 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 ZBTB5O15062 677 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 PLA2G6O60733 806 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 MFAP3LO75121 409 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 KIF20AO95235 890 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 TRIM14Q14142 442 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 NOM1Q5C9Z4 860 aaKnown RBP17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 WWC2Q6AWC2 1192 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 FAM160B2Q86V87 743 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 BLIDQ8IZY5 108 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 KIFC2Q96AC6 838 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 MTMR8Q96EF0 704 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 RPAP3Q9H6T3 665 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 FBXO28Q9NVF7 368 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 PCDHA4Q9UN74 947 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 MRFAP1Q9Y605 127 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 TEX33O43247 280 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 PPIL2Q13356 520 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 CDC37Q16543 378 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 SH3D19Q5HYK7 790 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 ZNF658Q5TYW1 1059 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 CREBRFQ8IUR6 639 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 C4orf32Q8N8J7 132 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 ANKRD20A12PQ8NF67 263 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 CCDC148Q8NFR7 591 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 ZNF446Q9NWS9 450 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 BARHL2Q9NY43 387 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 CTNND2Q9UQB3 1225 aa17.98■□□□□ 0.47
SQSTM1-213ENST00000510187 ATP8B1O43520 1251 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 MYL1P05976 194 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 CLCN6P51797 869 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 SNAP25P60880 206 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 PAK1Q13153 545 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 TUBB2AQ13885 445 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 QRICH1Q2TAL8 776 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 TUBB2BQ9BVA1 445 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 CARD6Q9BX69 1037 aa17.97■□□□□ 0.47
SQSTM1-213ENST00000510187 STXBP3O00186 592 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 CXCL11O14625 94 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 FLOT1O75955 427 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 MCM7P33993 719 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 STX17P56962 302 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 RBL2Q08999 1139 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 IL17AQ16552 155 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 SMC1BQ8NDV3 1235 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 PKNOX2Q96KN3 472 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 WDR24Q96S15 920 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 SLF1Q9BQI6 1058 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 ADGRG1Q9Y653 693 aa17.96■□□□□ 0.47
SQSTM1-213ENST00000510187 A0A0G2JLL6 359 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 hCG_1984214I3L0E3 225 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 M0R2N6 131 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 LAD1O00515 517 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 PPP1R11O60927 126 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 CASP1P29466 404 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 NAPAP54920 295 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 RRAGBQ5VZM2 374 aa17.95■□□□□ 0.46
SQSTM1-213ENST00000510187 TYW1BQ6NUM6 668 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms