RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 LCHNA4D1U4 455 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 NBNO60934 754 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
DDX41-211ENST00000510171 CXCL10P02778 98 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 PSEN2P49810 448 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 NT5C2P49902 561 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 MFAP1P55081 439 aaKnown RBP12.17□□□□□ -0.46
DDX41-211ENST00000510171 DEFB103AP81534 67 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 RBL2Q08999 1139 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 LAMC2Q13753 1193 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 IQCA1Q86XH1 822 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 PNMA1Q8ND90 353 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 RILPL2Q969X0 211 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 RAD9AQ99638 391 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 KATNAL1Q9BW62 490 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 KAT14Q9H8E8 782 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 HDAC6Q9UBN7 1215 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 GTF2IRD1Q9UHL9 959 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 DDX41Q9UJV9 622 aaKnown RBP12.17□□□□□ -0.46
DDX41-211ENST00000510171 MRPL11Q9Y3B7 192 aaKnown RBP12.17□□□□□ -0.46
DDX41-211ENST00000510171 CHD9Q3L8U1 2897 aa12.17□□□□□ -0.46
DDX41-211ENST00000510171 EFCAB14O75071 495 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 GJB5O95377 273 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
DDX41-211ENST00000510171 ERVK-21P61565 698 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 PTK7Q13308 1070 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 IKBKEQ14164 716 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 MFSD10Q14728 455 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 TMEM31Q5JXX7 168 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 FBXO11Q86XK2 927 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
DDX41-211ENST00000510171 GDPD5Q8WTR4 605 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 ANKS1AQ92625 1134 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 EMID1Q96A84 441 aaPredicted RBP12.16□□□□□ -0.46
DDX41-211ENST00000510171 TGS1Q96RS0 853 aaKnown RBP12.16□□□□□ -0.46
DDX41-211ENST00000510171 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 SUGCTQ9HAC7 445 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 ARIH1Q9Y4X5 557 aaPredicted RBP12.16□□□□□ -0.46
DDX41-211ENST00000510171 MRVI1Q9Y6F6 885 aa12.16□□□□□ -0.46
DDX41-211ENST00000510171 NEDD4P46934 1319 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 MUC3AQ02505 3323 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 LRRC37A2A6NM11 1700 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
DDX41-211ENST00000510171 KDM4AO75164 1064 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 NR3C2P08235 984 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 SDSP20132 328 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
DDX41-211ENST00000510171 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 QRICH1Q2TAL8 776 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 PPTC7Q8NI37 304 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 ZSCAN10Q96SZ4 725 aaPredicted RBP12.15□□□□□ -0.46
DDX41-211ENST00000510171 MTUS1Q9ULD2 1270 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
DDX41-211ENST00000510171 MYO9BQ13459 2157 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 LINC01553A4QN01 128 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 HAS3O00219 553 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 F2P00734 622 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 CFBP00751 764 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
DDX41-211ENST00000510171 TCTN1Q2MV58 587 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 ZNF618Q5T7W0 954 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 FAM117BQ6P1L5 589 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
DDX41-211ENST00000510171 LNPKQ9C0E8 428 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 JMJD4Q9H9V9 463 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 PXMP2Q9NR77 195 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 INSL6Q9Y581 213 aa12.14□□□□□ -0.47
DDX41-211ENST00000510171 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.13□□□□□ -0.47
DDX41-211ENST00000510171 B4E1Z4 1266 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 GPR37L1O60883 481 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 LGR5O75473 907 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 ZNF286BP0CG31 522 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 ZNF200P98182 395 aaPredicted RBP12.13□□□□□ -0.47
DDX41-211ENST00000510171 TRIM71Q2Q1W2 868 aaKnown RBP12.13□□□□□ -0.47
DDX41-211ENST00000510171 KCNV1Q6PIU1 500 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 TRAF7Q6Q0C0 670 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDX41-211ENST00000510171 ENAHQ8N8S7 591 aaPredicted RBP12.13□□□□□ -0.47
DDX41-211ENST00000510171 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDX41-211ENST00000510171 SPATA33Q96N06 139 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 AMNQ9BXJ7 453 aa12.13□□□□□ -0.47
DDX41-211ENST00000510171 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
DDX41-211ENST00000510171 CHD7Q9P2D1 2997 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 AMHP03971 560 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 MYCLP12524 364 aaPredicted RBP12.12□□□□□ -0.47
DDX41-211ENST00000510171 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
DDX41-211ENST00000510171 THPOP40225 353 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 HSD17B4P51659 736 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 MBTPS1Q14703 1052 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 LEXMQ3ZCV2 418 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms