RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 RCAN1P53805 252 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 TLE2Q04725 743 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 ARHGAP1Q07960 439 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 PWP2Q15269 919 aaKnown RBP15.63■□□□□ 0.09
SNF8-206ENST00000509989 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 OR6J1Q8NGC5 347 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 SMARCC2Q8TAQ2 1214 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 IL17RAQ96F46 866 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 AIFM3Q96NN9 605 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 IWS1Q96ST2 819 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 KIF2CQ99661 725 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 TSEN34Q9BSV6 310 aaKnown RBP15.63■□□□□ 0.09
SNF8-206ENST00000509989 PSTPIP2Q9H939 334 aa15.63■□□□□ 0.09
SNF8-206ENST00000509989 DDX41Q9UJV9 622 aaKnown RBP15.63■□□□□ 0.09
SNF8-206ENST00000509989 TRIM43BA6NCK2 446 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 PIK3CDO00329 1044 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 NAPAP54920 295 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 PPP2R5BQ15173 497 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
SNF8-206ENST00000509989 SCFD2Q8WU76 684 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 TRIM43Q96BQ3 446 aaPredicted RBP15.62■□□□□ 0.09
SNF8-206ENST00000509989 SLC26A6Q9BXS9 759 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 MAF1Q9H063 256 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 AP5M1Q9H0R1 490 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 STARD7Q9NQZ5 370 aa15.62■□□□□ 0.09
SNF8-206ENST00000509989 MAP3K20Q9NYL2 800 aaKnown RBP15.62■□□□□ 0.09
SNF8-206ENST00000509989 RANBP2P49792 3224 aaKnown RBP15.62■□□□□ 0.09
SNF8-206ENST00000509989 PRPF3O43395 683 aaKnown RBP15.61■□□□□ 0.09
SNF8-206ENST00000509989 PQBP1O60828 265 aaKnown RBP15.61■□□□□ 0.09
SNF8-206ENST00000509989 EIF3JO75822 258 aaKnown RBP15.61■□□□□ 0.09
SNF8-206ENST00000509989 ANAPC15P60006 121 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 ST3GAL1Q11201 340 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 SCRN1Q12765 414 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 AFG1LQ8WV93 481 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 PRO3102Q9H379 93 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 PDLIM7Q9NR12 457 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 BARHL2Q9NY43 387 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 PCDHA6Q9UN73 950 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 Q9Y3F1 56 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 PCDHA8Q9Y5H6 950 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 NR2E3Q9Y5X4 410 aa15.61■□□□□ 0.09
SNF8-206ENST00000509989 SMCO2A6NFE2 343 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 MOXD2PA6NHM9 499 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 CTDNEP1O95476 244 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 MYL3P08590 195 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 SCG2P13521 617 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 IFNAR1P17181 557 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 CCND2P30279 289 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 CDK7P50613 346 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 MDM2Q00987 491 aaPredicted RBP15.6■□□□□ 0.09
SNF8-206ENST00000509989 TTLL4Q14679 1199 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 SAMD3Q8N6K7 520 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 NECAB1Q8N987 351 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 RASGRP4Q8TDF6 673 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 VTI1AQ96AJ9 217 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 ZNF274Q96GC6 653 aaPredicted RBP15.6■□□□□ 0.09
SNF8-206ENST00000509989 RIC8AQ9NPQ8 531 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 GJB4Q9NTQ9 266 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 RBM27Q9P2N5 1060 aaKnown RBP15.6■□□□□ 0.09
SNF8-206ENST00000509989 GTF3C3Q9Y5Q9 886 aa15.6■□□□□ 0.09
SNF8-206ENST00000509989 MAGEA10P43363 369 aaPredicted RBP15.59■□□□□ 0.09
SNF8-206ENST00000509989 NEK4P51957 841 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 PURAQ00577 322 aaKnown RBP15.59■□□□□ 0.09
SNF8-206ENST00000509989 FAAP100Q0VG06 881 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 TRAF1Q13077 416 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 JAKMIP3Q5VZ66 844 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 PCSK9Q8NBP7 692 aaKnown RBP15.59■□□□□ 0.09
SNF8-206ENST00000509989 CYP2W1Q8TAV3 490 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 CUL5Q93034 780 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 GDF15Q99988 308 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 ALDH8A1Q9H2A2 487 aaPredicted RBP15.59■□□□□ 0.09
SNF8-206ENST00000509989 SPC25Q9HBM1 224 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 PRDM5Q9NQX1 630 aaPredicted RBP15.59■□□□□ 0.09
SNF8-206ENST00000509989 VPS54Q9P1Q0 977 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 MRVI1Q9Y6F6 885 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 SCN5AQ14524 2016 aa15.59■□□□□ 0.09
SNF8-206ENST00000509989 A6NJR5 290 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 B4DLN1 442 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 EDIL3O43854 480 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 ATP9AO75110 1047 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 MMP3P08254 477 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 ITGB5P18084 799 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 UBA1P22314 1058 aaKnown RBP15.58■□□□□ 0.08
SNF8-206ENST00000509989 CLK2P49760 499 aaKnown RBP15.58■□□□□ 0.08
SNF8-206ENST00000509989 ADCY7P51828 1080 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 MRPL12P52815 198 aaKnown RBP15.58■□□□□ 0.08
SNF8-206ENST00000509989 ME3Q16798 604 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 C1orf53Q5VUE5 145 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 SLC43A3Q8NBI5 491 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 KAT2BQ92831 832 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 GLT1D1Q96MS3 346 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 INPP4AQ96PE3 977 aaPredicted RBP15.58■□□□□ 0.08
SNF8-206ENST00000509989 UIMC1Q96RL1 719 aa15.58■□□□□ 0.08
SNF8-206ENST00000509989 MPHOSPH6Q99547 160 aaKnown RBP15.58■□□□□ 0.08
SNF8-206ENST00000509989 WDR81Q562E7 1941 aa15.57■□□□□ 0.08
SNF8-206ENST00000509989 CCDC196A0A1B0GTZ2 297 aa15.57■□□□□ 0.08
SNF8-206ENST00000509989 ARVCFO00192 962 aa15.57■□□□□ 0.08
SNF8-206ENST00000509989 PFKFB2O60825 505 aa15.57■□□□□ 0.08
SNF8-206ENST00000509989 GGPS1O95749 300 aa15.57■□□□□ 0.08
SNF8-206ENST00000509989 GH1P01241 217 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms