RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 FPR2P25090 351 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 VIPR1P32241 457 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 TXKP42681 527 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 GABREP78334 506 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 SQSTM1Q13501 440 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 MROH9Q5TGP6 573 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 LBX2Q6XYB7 198 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 CEP68Q76N32 757 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 PTPRN2Q92932 1015 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 TMEM169Q96HH4 297 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 PCGF6Q9BYE7 350 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 ASXL2Q76L83 1435 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 RUSC2Q8N2Y8 1516 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 TEX51A0A1B0GUA7 166 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 NOP9Q86U38 636 aaKnown RBP10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 KIF27Q86VH2 1401 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 BHLHE22Q8NFJ8 381 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 RNPC3Q96LT9 517 aaKnown RBP10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 KCNK12Q9HB15 430 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 BTG4Q9NY30 223 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
TRAPPC11-206ENST00000509857 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 NTRK1P04629 796 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 SLC6A11P48066 632 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 KIZQ2M2Z5 673 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 TRIM61Q5EBN2 209 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 IFNL3Q8IZI9 196 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 TRMT2BQ96GJ1 504 aaKnown RBP10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 PEX11GQ96HA9 241 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 KANSL2Q9H9L4 492 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 NUDT5Q9UKK9 219 aa10.02□□□□□ -0.81
TRAPPC11-206ENST00000509857 F8W031 263 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 AQP7O14520 342 aa10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 ZC3H14Q6PJT7 736 aaKnown RBP10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 TMC6Q7Z403 805 aa10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 DCP2Q8IU60 420 aaKnown RBP10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 TSPAN17Q96FV3 270 aa10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 CLDND1Q9NY35 253 aa10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 MBD1Q9UIS9 605 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC11-206ENST00000509857 ZC3H12DA2A288 527 aaKnown RBP10□□□□□ -0.81
TRAPPC11-206ENST00000509857 MED14OSP0DP75 135 aa10□□□□□ -0.81
TRAPPC11-206ENST00000509857 GSTCDQ8NEC7 633 aa10□□□□□ -0.81
TRAPPC11-206ENST00000509857 PPP1R16BQ96T49 567 aa10□□□□□ -0.81
TRAPPC11-206ENST00000509857 MRPL4Q9BYD3 311 aaKnown RBP10□□□□□ -0.81
TRAPPC11-206ENST00000509857 GCM1Q9NP62 436 aa10□□□□□ -0.81
TRAPPC11-206ENST00000509857 COA3Q9Y2R0 106 aaPredicted RBP10□□□□□ -0.81
TRAPPC11-206ENST00000509857 TRAF6Q9Y4K3 522 aa10□□□□□ -0.81
TRAPPC11-206ENST00000509857 KCNQ2O43526 872 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 IGSF3O75054 1194 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 KRT1P04264 644 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 GLDCP23378 1020 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 PRR5P85299 388 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 SLC9A5Q14940 896 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 ZNF648Q5T619 568 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 SYDE1Q6ZW31 735 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 JAZF1Q86VZ6 243 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 KRTAP4-8Q9BYQ9 185 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 EPB41L1Q9H4G0 881 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 CNTD2Q9H8S5 307 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 NCOA5Q9HCD5 579 aaKnown RBP9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 HCFC2Q9Y5Z7 792 aa9.99□□□□□ -0.81
TRAPPC11-206ENST00000509857 EFCAB14O75071 495 aa9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 FBLN1P23142 703 aa9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 GRK2P25098 689 aa9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 GRK3P35626 688 aa9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 SEC14L1Q92503 715 aa9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 CHAMP1Q96JM3 812 aa9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 SIRT5Q9NXA8 310 aa9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 PPARGC1AQ9UBK2 798 aaKnown RBP9.98□□□□□ -0.81
TRAPPC11-206ENST00000509857 WNT9AO14904 365 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 ZBTB7AO95365 584 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 TSPAN15O95858 294 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 NAT1P18440 290 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 EMC4Q5J8M3 183 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 SLC38A3Q99624 504 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 ALG1Q9BT22 464 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 SLC52A2Q9HAB3 445 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 RXFP1Q9HBX9 757 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 DBR1Q9UK59 544 aaKnown RBP9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 IRS2Q9Y4H2 1338 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 FANCD2Q9BXW9 1451 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
TRAPPC11-206ENST00000509857 ARVCFO00192 962 aa9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 ETV2O00321 342 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 ZEB1P37275 1124 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 CDR1P51861 262 aa9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 DLG4P78352 724 aa9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 AP5M1Q9H0R1 490 aa9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 SFMBT1Q9UHJ3 866 aa9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 TBX22Q9Y458 520 aa9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 MRPL42Q9Y6G3 142 aaKnown RBP9.96□□□□□ -0.82
TRAPPC11-206ENST00000509857 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 ESYT3A0FGR9 886 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 PLD2O14939 933 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 SGSM2O43147 1006 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 DGKIO75912 1065 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 CHRNA2Q15822 529 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms