RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 PRKAB2O43741 272 aa16.23■□□□□ 0.19
HMGCR-208ENST00000509431 SURF6O75683 361 aaKnown RBP16.23■□□□□ 0.19
HMGCR-208ENST00000509431 ATF7P17544 494 aaPredicted RBP16.23■□□□□ 0.19
HMGCR-208ENST00000509431 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.191e-11■■■■■ 35.1
HMGCR-208ENST00000509431 BMPR1AP36894 532 aa16.23■□□□□ 0.19
HMGCR-208ENST00000509431 ZNF618Q5T7W0 954 aa16.23■□□□□ 0.19
HMGCR-208ENST00000509431 FIBCD1Q8N539 461 aa16.23■□□□□ 0.19
HMGCR-208ENST00000509431 INCENPQ9NQS7 918 aa16.23■□□□□ 0.19
HMGCR-208ENST00000509431 USP15Q9Y4E8 981 aaPredicted RBP16.23■□□□□ 0.19
HMGCR-208ENST00000509431 TMEM232C9JQI7 657 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 GRM6O15303 877 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 MBD4O95243 580 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 PDGFBP01127 241 aaPredicted RBP16.22■□□□□ 0.19
HMGCR-208ENST00000509431 MMP1P03956 469 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
HMGCR-208ENST00000509431 RASA1P20936 1047 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 MBTPS1Q14703 1052 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 TRIM71Q2Q1W2 868 aaKnown RBP16.22■□□□□ 0.19
HMGCR-208ENST00000509431 PLEKHG4Q58EX7 1191 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 MUM1L1Q5H9M0 696 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 EFHBQ8N7U6 833 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 STAG1Q8WVM7 1258 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 ARHGAP45Q92619 1136 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 RPGRIP1Q96KN7 1286 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 CLEC1BQ9P126 229 aa16.22■□□□□ 0.19
HMGCR-208ENST00000509431 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 VPS13AQ96RL7 3174 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 PLA2G6O60733 806 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
HMGCR-208ENST00000509431 SLFN13Q68D06 897 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 CTR9Q6PD62 1173 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 ZBTB33Q86T24 672 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 C7orf31Q8N865 590 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 TMEM105Q8N8V8 129 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 IL17RAQ96F46 866 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 KATNAL1Q9BW62 490 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 SEMA4AQ9H3S1 761 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.19
HMGCR-208ENST00000509431 ARPP21Q9UBL0 812 aaPredicted RBP16.21■□□□□ 0.19
HMGCR-208ENST00000509431 NOP58Q9Y2X3 529 aaKnown RBP16.21■□□□□ 0.19
HMGCR-208ENST00000509431 ZNF292O60281 2723 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 IGKV6D-41A0A0C4DH26 115 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 UPP2O95045 317 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 TXNP10599 105 aaKnown RBP16.2■□□□□ 0.18
HMGCR-208ENST00000509431 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
HMGCR-208ENST00000509431 PDE4BQ07343 736 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 PDE4DQ08499 809 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 UBALD2Q8IYN6 164 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 SEPT8Q92599 483 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 COPS5Q92905 334 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 PURBQ96QR8 312 aaKnown RBP16.2■□□□□ 0.18
HMGCR-208ENST00000509431 PLVAPQ9BX97 442 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 IFIH1Q9BYX4 1025 aaKnown RBP16.2■□□□□ 0.18
HMGCR-208ENST00000509431 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
HMGCR-208ENST00000509431 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
HMGCR-208ENST00000509431 TTLL1O95922 423 aa16.19■□□□□ 0.18
HMGCR-208ENST00000509431 MMP3P08254 477 aa16.19■□□□□ 0.18
HMGCR-208ENST00000509431 BAATQ14032 418 aaPredicted RBP16.19■□□□□ 0.18
HMGCR-208ENST00000509431 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
HMGCR-208ENST00000509431 KAT2BQ92831 832 aa16.19■□□□□ 0.18
HMGCR-208ENST00000509431 CLP1Q92989 425 aaKnown RBP16.19■□□□□ 0.18
HMGCR-208ENST00000509431 MTMR4Q9NYA4 1195 aa16.19■□□□□ 0.18
HMGCR-208ENST00000509431 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
HMGCR-208ENST00000509431 RSPH10B2B2RC85 870 aa16.18■□□□□ 0.18
HMGCR-208ENST00000509431 B4DLN1 442 aa16.18■□□□□ 0.18
HMGCR-208ENST00000509431 RSPH10BP0C881 870 aa16.18■□□□□ 0.18
HMGCR-208ENST00000509431 MRPL12P52815 198 aaKnown RBP16.18■□□□□ 0.18
HMGCR-208ENST00000509431 AFG1LQ8WV93 481 aa16.18■□□□□ 0.18
HMGCR-208ENST00000509431 GMCL1Q96IK5 515 aa16.18■□□□□ 0.18
HMGCR-208ENST00000509431 DLL3Q9NYJ7 618 aa16.18■□□□□ 0.18
HMGCR-208ENST00000509431 CHD8Q9HCK8 2581 aa16.18■□□□□ 0.18
HMGCR-208ENST00000509431 LINC00271P0C7V0 271 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 EDNRBP24530 442 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 SLC1A4P43007 532 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 CLCN5P51795 746 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 ATP8B2P98198 1209 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 SLFN5Q08AF3 891 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 DGKDQ16760 1214 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 SUSD6Q92537 303 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 P2RX5Q93086 422 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 CEP95Q96GE4 821 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 ZNF287Q9HBT7 754 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 SLC4A4Q9Y6R1 1079 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 DMXL1Q9Y485 3027 aa16.17■□□□□ 0.18
HMGCR-208ENST00000509431 DMDP11532 3685 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 CEP250Q9BV73 2442 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 FSD2A1L4K1 749 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 GOLIM4O00461 696 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 GH1P01241 217 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 ICAM1P05362 532 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 ADD2P35612 726 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 PSEN2P49810 448 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 MTMR3Q13615 1198 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 ST3GAL2Q16842 350 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 SBK1Q52WX2 424 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 NAALADL2Q58DX5 795 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 ZNF444Q8N0Y2 327 aaPredicted RBP16.16■□□□□ 0.18
HMGCR-208ENST00000509431 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 APBB2Q92870 758 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms