RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 CATIPQ7Z7H3 387 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 DHX37Q8IY37 1157 aaKnown RBP17.86■□□□□ 0.45
TPM3-219ENST00000509409 PPM1EQ8WY54 764 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 MTMR8Q96EF0 704 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 PIGSQ96S52 555 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 COL25A1Q9BXS0 654 aaPredicted RBP17.86■□□□□ 0.45
TPM3-219ENST00000509409 MAP3K20Q9NYL2 800 aaKnown RBP17.86■□□□□ 0.45
TPM3-219ENST00000509409 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
TPM3-219ENST00000509409 GCOM1H8Y6P7 765 aaPredicted RBP17.85■□□□□ 0.45
TPM3-219ENST00000509409 PPP1R11O60927 126 aaPredicted RBP17.85■□□□□ 0.45
TPM3-219ENST00000509409 POLR2MP0CAP2 368 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 ACTN1P12814 892 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 HOXA13P31271 388 aaPredicted RBP17.85■□□□□ 0.45
TPM3-219ENST00000509409 HSD17B4P51659 736 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 LAMC2Q13753 1193 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 PTGISQ16647 500 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 SAMD3Q8N6K7 520 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 PIBF1Q8WXW3 757 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 SENP2Q9HC62 589 aa17.85■□□□□ 0.45
TPM3-219ENST00000509409 OPLAHO14841 1288 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 IQCF3P0C7M6 154 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 ATP2A2P16615 1042 aaKnown RBP17.84■□□□□ 0.45
TPM3-219ENST00000509409 IGFBP4P22692 258 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 RFC2P35250 354 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 FCHSD1Q86WN1 690 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 CCDC155Q8N6L0 562 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 PDCD2LQ9BRP1 358 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 ALG1Q9BT22 464 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 RIOX1Q9H6W3 641 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 YBX2Q9Y2T7 364 aaKnown RBP17.84■□□□□ 0.45
TPM3-219ENST00000509409 TAF6LQ9Y6J9 622 aa17.84■□□□□ 0.45
TPM3-219ENST00000509409 PNMA6FA0A0J9YX94 578 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 SORBS3O60504 671 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 KCNV1Q6PIU1 500 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 STOX1Q6ZVD7 989 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 C7orf31Q8N865 590 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 KAT2BQ92831 832 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 MAP4K1Q92918 833 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 RBM8AQ9Y5S9 174 aaKnown RBP17.83■□□□□ 0.44
TPM3-219ENST00000509409 LAMA4Q16363 1823 aa17.83■□□□□ 0.44
TPM3-219ENST00000509409 MYOGP15173 224 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 CCND2P30279 289 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 PSEN2P49810 448 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 TROAPQ12815 778 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 PGM5Q15124 567 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 GDF6Q6KF10 455 aaPredicted RBP17.82■□□□□ 0.44
TPM3-219ENST00000509409 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 VSIG10LQ86VR7 867 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 PPTC7Q8NI37 304 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 VWCEQ96DN2 955 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 ZFP91Q96JP5 570 aaPredicted RBP17.82■□□□□ 0.44
TPM3-219ENST00000509409 KATNAL1Q9BW62 490 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 PCDHA11Q9Y5I1 949 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 UNC80Q8N2C7 3258 aa17.82■□□□□ 0.44
TPM3-219ENST00000509409 CYTH3O43739 400 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 GHRHRQ02643 423 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 MFSD10Q14728 455 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 CCDC85BQ15834 202 aaPredicted RBP17.81■□□□□ 0.44
TPM3-219ENST00000509409 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 PPP2R2DQ66LE6 453 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 NFXL1Q6ZNB6 911 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 CAGE1Q8TC20 777 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 EMID1Q96A84 441 aaPredicted RBP17.81■□□□□ 0.44
TPM3-219ENST00000509409 SPATA33Q96N06 139 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 MLXIPQ9HAP2 919 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 HDAC6Q9UBN7 1215 aa17.81■□□□□ 0.44
TPM3-219ENST00000509409 GGPS1O95749 300 aa17.8■□□□□ 0.44
TPM3-219ENST00000509409 ZNF286BP0CG31 522 aa17.8■□□□□ 0.44
TPM3-219ENST00000509409 ANTXR2P58335 489 aa17.8■□□□□ 0.44
TPM3-219ENST00000509409 KIAA0753Q2KHM9 967 aa17.8■□□□□ 0.44
TPM3-219ENST00000509409 CELF3Q5SZQ8 465 aaKnown RBP17.8■□□□□ 0.44
TPM3-219ENST00000509409 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
TPM3-219ENST00000509409 USP38Q8NB14 1042 aa17.8■□□□□ 0.44
TPM3-219ENST00000509409 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
TPM3-219ENST00000509409 AFAP1L1Q8TED9 768 aa17.8■□□□□ 0.44
TPM3-219ENST00000509409 CDH23Q9H251 3354 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 KIF28PB7ZC32 967 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 PRC1O43663 620 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 PPFIA4O75335 1185 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 RGS20O76081 388 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 TGFB3P10600 412 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 SELPP16109 830 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 KIF5BP33176 963 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 MYSM1Q5VVJ2 828 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 MB21D2Q8IYB1 491 aaPredicted RBP17.79■□□□□ 0.44
TPM3-219ENST00000509409 IL31RAQ8NI17 732 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 RRP36Q96EU6 259 aaKnown RBP17.79■□□□□ 0.44
TPM3-219ENST00000509409 MYL10Q9BUA6 226 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 GTF2IRD1Q9UHL9 959 aa17.79■□□□□ 0.44
TPM3-219ENST00000509409 EYSQ5T1H1 3165 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 KCNJ6P48051 423 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 SP2Q02086 613 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 ADGRE1Q14246 886 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 ZNF654Q8IZM8 581 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 TMTC2Q8N394 836 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms