RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 GOLGA8AA7E2F4 631 aa18.6■□□□□ 0.57
PDLIM5-212ENST00000509333 GOLGA8BA8MQT2 603 aa18.6■□□□□ 0.57
PDLIM5-212ENST00000509333 MRPS9P82933 396 aaKnown RBP18.6■□□□□ 0.57
PDLIM5-212ENST00000509333 ZFP91Q96JP5 570 aaPredicted RBP18.6■□□□□ 0.57
PDLIM5-212ENST00000509333 PDLIM7Q9NR12 457 aa18.6■□□□□ 0.57
PDLIM5-212ENST00000509333 CYP46A1Q9Y6A2 500 aa18.6■□□□□ 0.57
PDLIM5-212ENST00000509333 CNTNAP5Q8WYK1 1306 aa18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 A0A0U1RQG5 324 aaPredicted RBP18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 DCDC2CA8MYV0 355 aa18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 KIAA0355O15063 1070 aa18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 ITGB8P26012 769 aa18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 PDIA3P30101 505 aaKnown RBP18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 MDM2Q00987 491 aaPredicted RBP18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 ITGA7Q13683 1181 aa18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 CUL5Q93034 780 aa18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 POLR3EQ9NVU0 708 aa18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 NAP1L2Q9ULW6 460 aaPredicted RBP18.59■□□□□ 0.57
PDLIM5-212ENST00000509333 CCDC196A0A1B0GTZ2 297 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 KPNA6O60684 536 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 CLTBP09497 229 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 TGFB3P10600 412 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 CPT1AP50416 773 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 METAP2P50579 478 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 PURAQ00577 322 aaKnown RBP18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 SP2Q02086 613 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 ARHGAP1Q07960 439 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 TOB2Q14106 344 aaPredicted RBP18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 NTRK3Q16288 839 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 TYW1BQ6NUM6 668 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 SMARCC2Q8TAQ2 1214 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 GPKOWQ92917 476 aaPredicted RBP eCLIP18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 SEZ6LQ9BYH1 1024 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 TMEM39AQ9NV64 488 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 PRKAG2Q9UGJ0 569 aa18.58■□□□□ 0.56
PDLIM5-212ENST00000509333 FRMPD4Q14CM0 1322 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 A0A1W2PPC1 479 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 SEC24BO95487 1268 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 GH1P01241 217 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 CD4P01730 458 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 CCND2P30279 289 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 PSMC6P62333 389 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 BRDTQ58F21 947 aaPredicted RBP18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 WWC2Q6AWC2 1192 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 KCNV1Q6PIU1 500 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 HEATR3Q7Z4Q2 680 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 AFG1LQ8WV93 481 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 EMID1Q96A84 441 aaPredicted RBP18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 LBHD1Q9BQE6 289 aaPredicted RBP18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 RTEL1Q9NZ71 1219 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 MRVI1Q9Y6F6 885 aa18.57■□□□□ 0.56
PDLIM5-212ENST00000509333 SPATA31C2B4DYI2 1134 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 PRPF3O43395 683 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 MYL3P08590 195 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 ICAM3P32942 547 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 MYSM1Q5VVJ2 828 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 FAM126BQ8IXS8 530 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 BADQ92934 168 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 ZNF274Q96GC6 653 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 LARP6Q9BRS8 491 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 MTG1Q9BT17 334 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 UPF3BQ9BZI7 483 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 UBE2OQ9C0C9 1292 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 PRDM5Q9NQX1 630 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 TBX21Q9UL17 535 aa18.56■□□□□ 0.56
PDLIM5-212ENST00000509333 MROH7Q68CQ1 1323 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 STAM2O75886 525 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 ANAPC15P60006 121 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 CCT2P78371 535 aaKnown RBP18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 PKN1Q16512 942 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 PFKFB3Q16875 520 aaPredicted RBP18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 XRRA1Q6P2D8 792 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 TEX2Q8IWB9 1127 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 IL17RAQ96F46 866 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 INPP4AQ96PE3 977 aaPredicted RBP18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 ALDH8A1Q9H2A2 487 aaPredicted RBP18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 RIC8AQ9NPQ8 531 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 PDRG1Q9NUG6 133 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 BARHL2Q9NY43 387 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 PCDHA6Q9UN73 950 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 PCDHA8Q9Y5H6 950 aa18.55■□□□□ 0.56
PDLIM5-212ENST00000509333 LRRC37A2A6NM11 1700 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 SMCO2A6NFE2 343 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 STXBP3O00186 592 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 TIMP1P01033 207 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 UBE2SQ16763 222 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 NBPF20Q3BBV1 942 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 CELF3Q5SZQ8 465 aaKnown RBP18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 PCNX4Q63HM2 1172 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 DHX37Q8IY37 1157 aaKnown RBP18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 TRPV6Q9H1D0 765 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 NID2Q14112 1375 aa18.54■□□□□ 0.56
PDLIM5-212ENST00000509333 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 PPFIA4O75335 1185 aa18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 RAG1P15918 1043 aa18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 IFNAR1P17181 557 aa18.53■□□□□ 0.56
PDLIM5-212ENST00000509333 NAPAP54920 295 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms