RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 SGSM2O43147 1006 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 FUCA1P04066 466 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 PAMP19021 973 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 LMO1P25800 156 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 MCM4P33991 863 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 CRKP46108 304 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 SEPHS1P49903 392 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 NFATC3Q12968 1075 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 TCEAL1Q15170 157 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 SEZ6Q53EL9 994 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 ERMP1Q7Z2K6 904 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 PLEKHO2Q8TD55 490 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 ZNF296Q8WUU4 475 aaPredicted RBP4.28□□□□□ -1.72
XRCC4-204ENST00000509268 CLIC6Q96NY7 704 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 WRNIP1Q96S55 665 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 FTSJ1Q9UET6 329 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 ZNF451Q9Y4E5 1061 aa4.28□□□□□ -1.72
XRCC4-204ENST00000509268 ITGAEP38570 1179 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 SLC6A11P48066 632 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 USP39Q53GS9 565 aaKnown RBP4.27□□□□□ -1.73
XRCC4-204ENST00000509268 CPNE8Q86YQ8 564 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 RNF34Q969K3 372 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 ADOQ96SZ5 270 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 NPHP3-ACAD11A0A0J9YXS1 232 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 C7orf72A4D263 438 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 MLLT6P55198 1093 aaPredicted RBP4.27□□□□□ -1.73
XRCC4-204ENST00000509268 CR1LQ2VPA4 569 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 TDRD10Q5VZ19 366 aaKnown RBP4.27□□□□□ -1.73
XRCC4-204ENST00000509268 PPFIBP1Q86W92 1011 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 ZDHHC9Q9Y397 364 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 BACE2Q9Y5Z0 518 aa4.27□□□□□ -1.73
XRCC4-204ENST00000509268 C2orf71A6NGG8 1288 aa4.26□□□□□ -1.73
XRCC4-204ENST00000509268 APOBRQ0VD83 1088 aa4.26□□□□□ -1.73
XRCC4-204ENST00000509268 TCTN3Q6NUS6 607 aa4.26□□□□□ -1.73
XRCC4-204ENST00000509268 SLITRK4Q8IW52 837 aa4.26□□□□□ -1.73
XRCC4-204ENST00000509268 NEU4Q8WWR8 484 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-204ENST00000509268 MCMBPQ9BTE3 642 aa4.26□□□□□ -1.73
XRCC4-204ENST00000509268 ADAM29Q9UKF5 820 aa4.26□□□□□ -1.73
XRCC4-204ENST00000509268 FOXS1O43638 330 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 SORBS3O60504 671 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 TP53P04637 393 aaPredicted RBP4.25□□□□□ -1.73
XRCC4-204ENST00000509268 IMPDH2P12268 514 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 PPP2R5DQ14738 602 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 CSRP2Q16527 193 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 MILR1Q7Z6M3 343 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 EXTL1Q92935 676 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 YIPF4Q9BSR8 244 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 WHRNQ9P202 907 aa4.25□□□□□ -1.73
XRCC4-204ENST00000509268 FAM86C2PA6NEL3 165 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 CNOT4O95628 575 aaKnown RBP4.24□□□□□ -1.73
XRCC4-204ENST00000509268 STAT5AP42229 794 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 LDLRAD3Q86YD5 345 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 ZCCHC14Q8WYQ9 949 aaKnown RBP4.24□□□□□ -1.73
XRCC4-204ENST00000509268 NKD1Q969G9 470 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 TMEM209Q96SK2 561 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 TM9SF2Q99805 663 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 COPRSQ9NQ92 184 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 UBP1Q9NZI7 540 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 IVNS1ABPQ9Y6Y0 642 aa4.24□□□□□ -1.73
XRCC4-204ENST00000509268 STXBP3O00186 592 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 PLSCR1O15162 318 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 COMTP21964 271 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 AGBL4Q5VU57 503 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 MRGPRGQ86SM5 289 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 GIMAP8Q8ND71 665 aaPredicted RBP4.23□□□□□ -1.73
XRCC4-204ENST00000509268 MMP19Q99542 508 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 SLC4A7Q9Y6M7 1214 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 ANKRD33BA6NCL7 494 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 ADH4P08319 380 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 GRB10Q13322 594 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 MROH9Q5TGP6 573 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 RIOX2Q8IUF8 465 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 TOE1Q96GM8 510 aaKnown RBP4.23□□□□□ -1.73
XRCC4-204ENST00000509268 GNRHR2Q96P88 292 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 LMF1Q96S06 567 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 NT5C1AQ9BXI3 368 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 MARCH2Q9P0N8 246 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 CROTQ9UKG9 612 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 ZNF214Q9UL59 606 aaPredicted RBP4.23□□□□□ -1.73
XRCC4-204ENST00000509268 ZNRF3Q9ULT6 936 aa4.23□□□□□ -1.73
XRCC4-204ENST00000509268 U2SURPO15042 1029 aaKnown RBP4.22□□□□□ -1.73
XRCC4-204ENST00000509268 VAMP4O75379 141 aa4.22□□□□□ -1.73
XRCC4-204ENST00000509268 AMPD2Q01433 879 aa4.22□□□□□ -1.73
XRCC4-204ENST00000509268 TRMT10BQ6PF06 316 aaKnown RBP4.22□□□□□ -1.73
XRCC4-204ENST00000509268 RALYLQ86SE5 291 aaKnown RBP4.22□□□□□ -1.73
XRCC4-204ENST00000509268 DPF3Q92784 378 aa4.22□□□□□ -1.73
XRCC4-204ENST00000509268 FAM161BQ96MY7 647 aa4.22□□□□□ -1.73
XRCC4-204ENST00000509268 GBP3Q9H0R5 595 aa4.22□□□□□ -1.73
XRCC4-204ENST00000509268 MRS2Q9HD23 443 aa4.22□□□□□ -1.73
XRCC4-204ENST00000509268 VTI1BQ9UEU0 232 aa4.22□□□□□ -1.73
XRCC4-204ENST00000509268 C22orf46C9J442 243 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 CBFA2T2O43439 604 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 THBDP07204 575 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 FBLP22087 321 aaKnown RBP4.21□□□□□ -1.74
XRCC4-204ENST00000509268 DGCR2P98153 550 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 KCNA1Q09470 495 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 DPY19L1Q2PZI1 675 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 UNC5AQ6ZN44 842 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 C1orf210Q8IVY1 113 aa4.21□□□□□ -1.74
XRCC4-204ENST00000509268 ZSWIM3Q96MP5 696 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms