RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CEP131Q9UPN4 1083 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CFAP69A5D8W1 941 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 SAT1P21673 171 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 SPATS2Q86XZ4 545 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 PPM1KQ8N3J5 372 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 RMDN2Q96LZ7 410 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 GDAP1L1Q96MZ0 367 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 RNF38Q9H0F5 515 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 TMEM5Q9Y2B1 443 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 PPP2R3BQ9Y5P8 575 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 GTPBP10A4D1E9 387 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 LSM1O15116 133 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 KIF1CO43896 1103 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 F2P00734 622 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 MSNP26038 577 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 CDC25BP30305 580 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 SFSWAPQ12872 951 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 TLR1Q15399 786 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 VHLLQ6RSH7 139 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 PRR23CQ6ZRP0 262 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 NLRP14Q86W24 1093 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 PLEKHM2Q8IWE5 1019 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 SAMD14Q8IZD0 417 aaPredicted RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 UTP15Q8TED0 518 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 SMARCAD1Q9H4L7 1026 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 PCIF1Q9H4Z3 704 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 OGDHLQ9ULD0 1010 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 KRT87PA6NCN2 255 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 CFAP99D6REC4 459 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 UBAP1LF5GYI3 381 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 CEP104O60308 925 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 DPY19L2Q6NUT2 758 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 ANGPTL8Q6UXH0 198 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 KRT28Q7Z3Y7 464 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 RETREG3Q86VR2 466 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 PCSK9Q8NBP7 692 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 AKT1S1Q96B36 256 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 EYA1Q99502 592 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 KIF2CQ99661 725 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 ACAT2Q9BWD1 397 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 C12orf49Q9H741 205 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 KMT5AQ9NQR1 393 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 ADD3Q9UEY8 706 aaKnown RBP4.34□□□□□ -1.71
NEDD4-209ENST00000508871 DDX19BQ9UMR2 479 aa4.34□□□□□ -1.71
NEDD4-209ENST00000508871 ITGB4P16144 1822 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 SPATA31A3Q5VYP0 1347 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 H0YHG0 523 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 STMND1H3BQB6 276 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 PPFIA2O75334 1257 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 KPNA1P52294 538 aaPredicted RBP4.34□□□□□ -1.72
NEDD4-209ENST00000508871 SARNPP82979 210 aaKnown RBP4.34□□□□□ -1.72
NEDD4-209ENST00000508871 BTKQ06187 659 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 RBL2Q08999 1139 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 ANGPT1Q15389 498 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 TKFCQ3LXA3 575 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC40Q4G0X9 1142 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 ESCO1Q5FWF5 840 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 KANK3Q6NY19 840 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 KRT25Q7Z3Z0 450 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 TTC7BQ86TV6 843 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 ZC3H7AQ8IWR0 971 aaKnown RBP4.34□□□□□ -1.72
NEDD4-209ENST00000508871 PALM2Q8IXS6 379 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 PHF12Q96QT6 1004 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 TRIM8Q9BZR9 551 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 SEPT9Q9UHD8 586 aaPredicted RBP4.34□□□□□ -1.72
NEDD4-209ENST00000508871 MAFFQ9ULX9 164 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 ABCC4O15439 1325 aa4.34□□□□□ -1.72
NEDD4-209ENST00000508871 SOS2Q07890 1332 aaPredicted RBP4.34□□□□□ -1.72
NEDD4-209ENST00000508871 ATP10DQ9P241 1426 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 GOLGA6L19H0YKK7 550 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 GUCA1CO95843 209 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 P4HA1P13674 534 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 BASP1P80723 227 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 OASLQ15646 514 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 FKBP15Q5T1M5 1219 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 KIAA1211LQ6NV74 962 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 ATG16L2Q8NAA4 619 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF280CQ8ND82 737 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 GRIN3AQ8TCU5 1115 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 DYDC1Q8WWB3 177 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 CASP10Q92851 521 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 ACSF2Q96CM8 615 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 SIPA1Q96FS4 1042 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 AHCYL2Q96HN2 611 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 SPAG5Q96R06 1193 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 TAB2Q9NYJ8 693 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 KLK14Q9P0G3 267 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 ZSWIM5Q9P217 1185 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 CDV3Q9UKY7 258 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 GNAT3A8MTJ3 354 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 MEN1O00255 615 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 TPM4P67936 248 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 AP1B1Q10567 949 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 RRS1Q15050 365 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 CDC37Q16543 378 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 DARS2Q6PI48 645 aaKnown RBP4.33□□□□□ -1.72
NEDD4-209ENST00000508871 KLHL24Q6TFL4 600 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 VSIG1Q86XK7 387 aa4.33□□□□□ -1.72
NEDD4-209ENST00000508871 SYNPOQ8N3V7 929 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms