RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 LCORLQ8N3X6 602 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 SLC44A5Q8NCS7 719 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 CCDC17Q96LX7 622 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 NUCKS1Q9H1E3 243 aaKnown RBP10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 TTYH1Q9H313 450 aaPredicted RBP10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 GPAMQ9HCL2 828 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 ATP8A2Q9NTI2 1148 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZNF358Q9NW07 568 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 PHF24Q9UPV7 400 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 DIS3Q9Y2L1 958 aaKnown RBP10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 GOLIM4O00461 696 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 KIAA0355O15063 1070 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 WDR46O15213 610 aaKnown RBP10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 AKR1B1P15121 316 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 ITGB8P26012 769 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 ICA1Q05084 483 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 PLS1Q14651 629 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZNF792Q3KQV3 632 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 EFHC2Q5JST6 749 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 C12orf60Q5U649 245 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 RIOX2Q8IUF8 465 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 CLASRPQ8N2M8 674 aaKnown RBP10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZSCAN1Q8NBB4 408 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 FERMT2Q96AC1 680 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 TINF2Q9BSI4 451 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 SH2D4AQ9H788 454 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 PRDM5Q9NQX1 630 aaPredicted RBP10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 NCOR1O75376 2440 aa10.36□□□□□ -0.75
COL4A3BP-206ENST00000508809 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 SMIM22K7EJ46 135 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 PRKAB2O43741 272 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZNF865P0CJ78 1059 aaPredicted RBP10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 RARBP10826 455 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 ADD2P35612 726 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 CDK8P49336 464 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 LBRQ14739 615 aaKnown RBP10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 SPICE1Q8N0Z3 855 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 REPS2Q8NFH8 660 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 KIF1BPQ96EK5 621 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 TOX2Q96NM4 488 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 CNTNAP3BQ96NU0 1288 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 CNTNAP3Q9BZ76 1288 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 ARMT1Q9H993 441 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 XPNPEP3Q9NQH7 507 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 STK17AQ9UEE5 414 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 ROBO3Q96MS0 1386 aa10.35□□□□□ -0.75
COL4A3BP-206ENST00000508809 USP17L12C9JPN9 530 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 USP17L21D6R901 530 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 VWA5AO00534 786 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 ADAMTS4O75173 837 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 CLTBP09497 229 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 EEF2P13639 858 aaKnown RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 TAL1P17542 331 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 STAT3P40763 770 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 EPHB4P54760 987 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 CLDN10P78369 228 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 C16orf86Q6ZW13 317 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 ANKRD33Q7Z3H0 272 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 RNF180Q86T96 592 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 CLEC10AQ8IUN9 316 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 RPAP2Q8IXW5 612 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 MSL3Q8N5Y2 521 aaKnown RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 KLHDC9Q8NEP7 349 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 MAFAQ8NHW3 353 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 MMP19Q99542 508 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 KANSL2Q9H9L4 492 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 FBXO28Q9NVF7 368 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 CUEDC1Q9NWM3 386 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZNF214Q9UL59 606 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 PPP1R9AQ9ULJ8 1098 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 MYH7P12883 1935 aa10.34□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 A0A1W2PQ45 241 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 A0A1W2PQY0 241 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 RAB11FIP3O75154 756 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 MBD4O95243 580 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 PGK1P00558 417 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 PGK2P07205 417 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 IFIT2P09913 472 aaKnown RBP10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 ATP5JP18859 108 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 MSX1P28360 303 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 COPB2P35606 906 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 FAAP100Q0VG06 881 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 KCTD2Q14681 263 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 UBE3CQ15386 1083 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 DBN1Q16643 649 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 CCSAPQ6IQ19 270 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 MAMDC4Q6UXC1 1216 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 SIRT2Q8IXJ6 389 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 SIX5Q8N196 739 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 MYLIPQ8WY64 445 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms