RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 HOXD8P13378 290 aaPredicted RBP14.03□□□□□ -0.16
CLDND1-218ENST00000508503 SMAD3P84022 425 aaKnown RBP14.03□□□□□ -0.16
CLDND1-218ENST00000508503 PTPN11Q06124 597 aaPredicted RBP14.03□□□□□ -0.16
CLDND1-218ENST00000508503 KRT32Q14532 448 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 NBPF20Q3BBV1 942 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 ADCK5Q3MIX3 580 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 TMEM240Q5SV17 173 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 RASIP1Q5U651 963 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 NFRKBQ6P4R8 1299 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 KCNV1Q6PIU1 500 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 NFXL1Q6ZNB6 911 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 AFG1LQ8WV93 481 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 NOC4LQ9BVI4 516 aaKnown RBP14.03□□□□□ -0.16
CLDND1-218ENST00000508503 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 MTMR10Q9NXD2 777 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 SLC12A7Q9Y666 1083 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 MYH7BA7E2Y1 1941 aa14.02□□□□□ -0.16
CLDND1-218ENST00000508503 MYL3P08590 195 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 SUPT20HL2P0C7V6 817 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 CYP2C18P33260 490 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 MRPS9P82933 396 aaKnown RBP14.02□□□□□ -0.17
CLDND1-218ENST00000508503 PPIGQ13427 754 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLDND1-218ENST00000508503 LAMC2Q13753 1193 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 MYSM1Q5VVJ2 828 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 APOA5Q6Q788 366 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 FBXL16Q8N461 479 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 TMEM199Q8N511 208 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 DEFB123Q8N688 67 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 IL31RAQ8NI17 732 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLDND1-218ENST00000508503 CDH23Q9H251 3354 aa14.02□□□□□ -0.17
CLDND1-218ENST00000508503 EPB41L2O43491 1005 aaKnown RBP14.01□□□□□ -0.17
CLDND1-218ENST00000508503 PPFIA4O75335 1185 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 STAM2O75886 525 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 MMP3P08254 477 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
CLDND1-218ENST00000508503 MYCLP12524 364 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-218ENST00000508503 CSF2RAP15509 400 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 RXRAP19793 462 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
CLDND1-218ENST00000508503 CCND2P30279 289 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 ICAM3P32942 547 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 HSPA4P34932 840 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 SP2Q02086 613 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 FUT2Q10981 343 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 TMTC3Q6ZXV5 915 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 Q7L0L9 218 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 SESTD1Q86VW0 696 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 FCHSD1Q86WN1 690 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 KAT2BQ92831 832 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 INPP4AQ96PE3 977 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-218ENST00000508503 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 IL23AQ9NPF7 189 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 BRPF3Q9ULD4 1205 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 MRVI1Q9Y6F6 885 aa14.01□□□□□ -0.17
CLDND1-218ENST00000508503 UMODL1Q5DID0 1318 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 HAS3O00219 553 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 RCAN1P53805 252 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 DGKDQ16760 1214 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 CELF3Q5SZQ8 465 aaKnown RBP14□□□□□ -0.17
CLDND1-218ENST00000508503 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 XRRA1Q6P2D8 792 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 SYNE3Q6ZMZ3 975 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 TEX2Q8IWB9 1127 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 DHX37Q8IY37 1157 aaKnown RBP14□□□□□ -0.17
CLDND1-218ENST00000508503 CMTR1Q8N1G2 835 aaKnown RBP14□□□□□ -0.17
CLDND1-218ENST00000508503 PPTC7Q8NI37 304 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 PIBF1Q8WXW3 757 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 PPP1R12CQ9BZL4 782 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
CLDND1-218ENST00000508503 TRMT13Q9NUP7 481 aaKnown RBP14□□□□□ -0.17
CLDND1-218ENST00000508503 SEC63Q9UGP8 760 aaKnown RBP14□□□□□ -0.17
CLDND1-218ENST00000508503 SNX14Q9Y5W7 946 aa14□□□□□ -0.17
CLDND1-218ENST00000508503 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.99□□□□□ -0.17
CLDND1-218ENST00000508503 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.99□□□□□ -0.17
CLDND1-218ENST00000508503 SPATA31C2B4DYI2 1134 aa13.99□□□□□ -0.17
CLDND1-218ENST00000508503 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
CLDND1-218ENST00000508503 ZNF365Q70YC5 407 aa13.99□□□□□ -0.17
CLDND1-218ENST00000508503 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
CLDND1-218ENST00000508503 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
CLDND1-218ENST00000508503 AGXT2Q9BYV1 514 aa13.99□□□□□ -0.17
CLDND1-218ENST00000508503 WNT8AQ9H1J5 351 aa13.99□□□□□ -0.17
CLDND1-218ENST00000508503 PSTPIP2Q9H939 334 aa13.99□□□□□ -0.17
CLDND1-218ENST00000508503 RBM28Q9NW13 759 aaKnown RBP13.99□□□□□ -0.17
CLDND1-218ENST00000508503 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 ZBTB43O43298 467 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 F2P00734 622 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 CYP2C9P11712 490 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 SEMA3FQ13275 785 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 HSDL1Q3SXM5 330 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 PCNX4Q63HM2 1172 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 MICU3Q86XE3 530 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 RAB11FIP4Q86YS3 637 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 CCDC82Q8N4S0 544 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 HERVK_113Q902F9 699 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
CLDND1-218ENST00000508503 TCEANC2Q96MN5 208 aa13.98□□□□□ -0.17
CLDND1-218ENST00000508503 SENP7Q9BQF6 1050 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms