RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 CPT1AP50416 773 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 METAP2P50579 478 aaKnown RBP eCLIP10.82□□□□□ -0.683e-6■■■■□ 22.7
DDX41-209ENST00000508279 ITGA7Q13683 1181 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 PGM5Q15124 567 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 C1orf53Q5VUE5 145 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 KCNB2Q92953 911 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 TRIM43Q96BQ3 446 aaPredicted RBP10.82□□□□□ -0.68
DDX41-209ENST00000508279 USP26Q9BXU7 913 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 MAF1Q9H063 256 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 MAP3K20Q9NYL2 800 aaKnown RBP10.82□□□□□ -0.68
DDX41-209ENST00000508279 MROH7Q68CQ1 1323 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 CNTNAP5Q8WYK1 1306 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
DDX41-209ENST00000508279 PPFIA3O75145 1194 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 CABYRO75952 493 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 GH1P01241 217 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 CDC27P30260 824 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 FXR1P51114 621 aaKnown RBP eCLIP10.81□□□□□ -0.68
DDX41-209ENST00000508279 FAAP100Q0VG06 881 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 UBE2SQ16763 222 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 FAM47CQ5HY64 1035 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 SAMD3Q8N6K7 520 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 AFG1LQ8WV93 481 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 LARP6Q9BRS8 491 aaKnown RBP10.81□□□□□ -0.68
DDX41-209ENST00000508279 PRO3102Q9H379 93 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 PSTPIP2Q9H939 334 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 POLR3EQ9NVU0 708 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 RTEL1Q9NZ71 1219 aa10.81□□□□□ -0.68
DDX41-209ENST00000508279 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
DDX41-209ENST00000508279 ITGB8P26012 769 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 BMP8BP34820 402 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
DDX41-209ENST00000508279 NAPAP54920 295 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 NKX3-2P78367 333 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 CCT2P78371 535 aaKnown RBP10.8□□□□□ -0.68
DDX41-209ENST00000508279 WWC2Q6AWC2 1192 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 CCDC62Q6P9F0 684 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 ANKRD33Q7Z3H0 272 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 VSIG10LQ86VR7 867 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 DHX37Q8IY37 1157 aaKnown RBP10.8□□□□□ -0.68
DDX41-209ENST00000508279 TDHQ8IZJ6 230 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 MTG1Q9BT17 334 aaPredicted RBP10.8□□□□□ -0.68
DDX41-209ENST00000508279 UPF3BQ9BZI7 483 aaKnown RBP10.8□□□□□ -0.68
DDX41-209ENST00000508279 PPP1R12CQ9BZL4 782 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 CYP46A1Q9Y6A2 500 aa10.8□□□□□ -0.68
DDX41-209ENST00000508279 TRIP12Q14669 1992 aaPredicted RBP10.79□□□□□ -0.68
DDX41-209ENST00000508279 CCDC196A0A1B0GTZ2 297 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 SPDYE3A6NKU9 549 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 MEIS2O14770 477 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 MMP3P08254 477 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 CDK7P50613 346 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 PURAQ00577 322 aaKnown RBP10.79□□□□□ -0.68
DDX41-209ENST00000508279 GHRHRQ02643 423 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 ARHGAP1Q07960 439 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 RUFY3Q7L099 469 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 FAM126BQ8IXS8 530 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 TOX2Q96NM4 488 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 TRPV6Q9H1D0 765 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
DDX41-209ENST00000508279 DDX41Q9UJV9 622 aaKnown RBP10.79□□□□□ -0.68
DDX41-209ENST00000508279 SCN10AQ9Y5Y9 1956 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 GRIN2DO15399 1336 aa10.79□□□□□ -0.68
DDX41-209ENST00000508279 RANBP2P49792 3224 aaKnown RBP10.78□□□□□ -0.68
DDX41-209ENST00000508279 A0A1W2PPC1 479 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 A6NJR5 290 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 SOX1O00570 391 aaPredicted RBP10.78□□□□□ -0.68
DDX41-209ENST00000508279 KIAA0355O15063 1070 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 B4GALT4O60513 344 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 RGS20O76081 388 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 GGPS1O95749 300 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 ADCY7P51828 1080 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 MRPS9P82933 396 aaKnown RBP10.78□□□□□ -0.68
DDX41-209ENST00000508279 AKAP17AQ02040 695 aaKnown RBP10.78□□□□□ -0.68
DDX41-209ENST00000508279 SP4Q02446 784 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 STK3Q13188 491 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 NBPF20Q3BBV1 942 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 GNPTABQ3T906 1256 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 PHKBQ93100 1093 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 LRCH3Q96II8 777 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 PGBD1Q96JS3 809 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 SPATA33Q96N06 139 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 ALG1Q9BT22 464 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 MLXIPQ9HAP2 919 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 NCOA5Q9HCD5 579 aaKnown RBP10.78□□□□□ -0.68
DDX41-209ENST00000508279 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 PDRG1Q9NUG6 133 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 TRMT13Q9NUP7 481 aaKnown RBP10.78□□□□□ -0.68
DDX41-209ENST00000508279 PKD2L1Q9P0L9 805 aa10.78□□□□□ -0.68
DDX41-209ENST00000508279 KAT6AQ92794 2004 aa10.77□□□□□ -0.68
DDX41-209ENST00000508279 SMCO2A6NFE2 343 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 STXBP3O00186 592 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 PIK3CDO00329 1044 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 EPB41L2O43491 1005 aaKnown RBP10.77□□□□□ -0.69
DDX41-209ENST00000508279 KPNA6O60684 536 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 TIMP1P01033 207 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 ZNF286BP0CG31 522 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 UBA1P22314 1058 aaKnown RBP10.77□□□□□ -0.69
DDX41-209ENST00000508279 CYP2C18P33260 490 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 CCL23P55773 120 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 SP2Q02086 613 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms