RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 CPT1AP50416 773 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLDND1-215ENST00000507874 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 SMARCC2Q8TAQ2 1214 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 CUL5Q93034 780 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 TOX2Q96NM4 488 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 NID2Q14112 1375 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 MYL3P08590 195 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 CCND2P30279 289 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 PSMC6P62333 389 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 FAAP100Q0VG06 881 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 TOB2Q14106 344 aaPredicted RBP17.4■□□□□ 0.38
CLDND1-215ENST00000507874 SLC43A3Q8NBI5 491 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
CLDND1-215ENST00000507874 TM6SF1Q9BZW5 370 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 PSTPIP2Q9H939 334 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 POLR3EQ9NVU0 708 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
CLDND1-215ENST00000507874 CYP46A1Q9Y6A2 500 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 MRVI1Q9Y6F6 885 aa17.4■□□□□ 0.38
CLDND1-215ENST00000507874 V9GY48 417 aaPredicted RBP17.4■□□□□ 0.38
CLDND1-215ENST00000507874 CEP290O15078 2479 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 A6NJR5 290 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 DCDC2CA8MYV0 355 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 GH1P01241 217 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 EVCP57679 992 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
CLDND1-215ENST00000507874 ARHGAP1Q07960 439 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 ITGA7Q13683 1181 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 UBE2SQ16763 222 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 TYW1BQ6NUM6 668 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 FAM126BQ8IXS8 530 aa17.39■□□□□ 0.37
CLDND1-215ENST00000507874 LBHD1Q9BQE6 289 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-215ENST00000507874 UBE2OQ9C0C9 1292 aaKnown RBP17.39■□□□□ 0.37
CLDND1-215ENST00000507874 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
CLDND1-215ENST00000507874 A0A1W2PPC1 479 aa17.38■□□□□ 0.37
CLDND1-215ENST00000507874 KIAA0355O15063 1070 aa17.38■□□□□ 0.37
CLDND1-215ENST00000507874 ITGB8P26012 769 aa17.38■□□□□ 0.37
CLDND1-215ENST00000507874 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
CLDND1-215ENST00000507874 BRDTQ58F21 947 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-215ENST00000507874 AFG1LQ8WV93 481 aa17.38■□□□□ 0.37
CLDND1-215ENST00000507874 BADQ92934 168 aa17.38■□□□□ 0.37
CLDND1-215ENST00000507874 TMEM39AQ9NV64 488 aa17.38■□□□□ 0.37
CLDND1-215ENST00000507874 MYH7BA7E2Y1 1941 aa17.37■□□□□ 0.37
CLDND1-215ENST00000507874 STXBP3O00186 592 aa17.37■□□□□ 0.37
CLDND1-215ENST00000507874 PDIA3P30101 505 aaKnown RBP17.37■□□□□ 0.37
CLDND1-215ENST00000507874 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLDND1-215ENST00000507874 NAPAP54920 295 aa17.37■□□□□ 0.37
CLDND1-215ENST00000507874 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
CLDND1-215ENST00000507874 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
CLDND1-215ENST00000507874 SCN10AQ9Y5Y9 1956 aa17.36■□□□□ 0.37
CLDND1-215ENST00000507874 hCG_1984214I3L0E3 225 aa17.36■□□□□ 0.37
CLDND1-215ENST00000507874 CD4P01730 458 aa17.36■□□□□ 0.37
CLDND1-215ENST00000507874 MMP3P08254 477 aa17.36■□□□□ 0.37
CLDND1-215ENST00000507874 CCT2P78371 535 aaKnown RBP17.36■□□□□ 0.37
CLDND1-215ENST00000507874 SP2Q02086 613 aa17.36■□□□□ 0.37
CLDND1-215ENST00000507874 KCNV1Q6PIU1 500 aa17.36■□□□□ 0.37
CLDND1-215ENST00000507874 ZNF713Q8N859 430 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-215ENST00000507874 INPP4AQ96PE3 977 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-215ENST00000507874 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
CLDND1-215ENST00000507874 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
CLDND1-215ENST00000507874 TLR3O15455 904 aaKnown RBP17.35■□□□□ 0.37
CLDND1-215ENST00000507874 SORBS3O60504 671 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 KPNA6O60684 536 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 STAM2O75886 525 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 RAG1P15918 1043 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 UBA1P22314 1058 aaKnown RBP17.35■□□□□ 0.37
CLDND1-215ENST00000507874 SEMA3FQ13275 785 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 LAMC2Q13753 1193 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 NTRK3Q16288 839 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PFKFB3Q16875 520 aaPredicted RBP17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PCNX4Q63HM2 1172 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PPP1R18Q6NYC8 613 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 DHX37Q8IY37 1157 aaKnown RBP17.35■□□□□ 0.37
CLDND1-215ENST00000507874 TDHQ8IZJ6 230 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 EMID1Q96A84 441 aaPredicted RBP17.35■□□□□ 0.37
CLDND1-215ENST00000507874 NCOA5Q9HCD5 579 aaKnown RBP17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PDRG1Q9NUG6 133 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 BARHL2Q9NY43 387 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
CLDND1-215ENST00000507874 PRPF3O43395 683 aaKnown RBP17.34■□□□□ 0.37
CLDND1-215ENST00000507874 PPFIA3O75145 1194 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 SEC24BO95487 1268 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 GGPS1O95749 300 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 TGFB3P10600 412 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 SCG2P13521 617 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 ANAPC15P60006 121 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 PKN1Q16512 942 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 CELF3Q5SZQ8 465 aaKnown RBP17.34■□□□□ 0.37
CLDND1-215ENST00000507874 MYSM1Q5VVJ2 828 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 DNAH12Q6ZR08 3092 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 PHKBQ93100 1093 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 SEZ6LQ9BYH1 1024 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 TRPV6Q9H1D0 765 aa17.34■□□□□ 0.37
CLDND1-215ENST00000507874 RIC8AQ9NPQ8 531 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms