RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 PHAXQ9H814 394 aaKnown RBP4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 METTL5Q9NRN9 209 aaKnown RBP4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 SMPD4Q9NXE4 827 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 SUGT1Q9Y2Z0 365 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 SLC12A7Q9Y666 1083 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 A0A1W2PQH9 124 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 NPHS1O60500 1241 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 FUCA1P04066 466 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 NTRK1P04629 796 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 CYP2C8P10632 490 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 ERCC5P28715 1186 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 PAK2Q13177 524 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 GNL2Q13823 731 aaKnown RBP4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 RNF187Q5TA31 235 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 SOGA3Q5TF21 947 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 DPH6Q7L8W6 267 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 ARHGEF39Q8N4T4 335 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 RBM15Q96T37 977 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 SYT3Q9BQG1 590 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 GORASP1Q9BQQ3 440 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 EFR3BQ9Y2G0 817 aa4.72□□□□□ -1.65
HMGB3P15-201ENST00000507326 TRBV23OR9-2A0A075B6M9 112 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 C7orf72A4D263 438 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 RAB11FIP3O75154 756 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 GRB10Q13322 594 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 COL9A2Q14055 689 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 WDR78Q5VTH9 848 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 SMC5Q8IY18 1101 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 LINC00482Q8N8I6 264 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 KLHL6Q8WZ60 621 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 LOXL4Q96JB6 756 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 TANGO6Q9C0B7 1094 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 MARCH2Q9P0N8 246 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 CLEC1BQ9P126 229 aa4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 DDX41Q9UJV9 622 aaKnown RBP4.71□□□□□ -1.66
HMGB3P15-201ENST00000507326 TLDC2A0PJX2 215 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 TNFRSF1AP19438 455 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 THBS2P35442 1172 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 GIPRP48546 466 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 PPP2R5EQ16537 467 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 RGL3Q3MIN7 710 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 MBLAC2Q68D91 279 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 GIMAP6Q6P9H5 292 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 STK32CQ86UX6 486 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 DCP2Q8IU60 420 aaKnown RBP4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 FAM26EQ8N5C1 309 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 C19orf47Q8N9M1 422 aaKnown RBP4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 RCC1LQ96I51 464 aaKnown RBP4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 C11orf84Q9BUA3 381 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 BTG4Q9NY30 223 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 AKT3Q9Y243 479 aa4.7□□□□□ -1.66
HMGB3P15-201ENST00000507326 MATN3O15232 486 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 KCNH1O95259 989 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 PLATP00750 562 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 PTMAP06454 111 aaKnown RBP4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 PLS3P13797 630 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 ATP2B1P20020 1258 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 RPL13P26373 211 aaKnown RBP4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 SOX9P48436 509 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 SCRN1Q12765 414 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 PTPROQ16827 1216 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 LONRF3Q496Y0 759 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 TBC1D10BQ4KMP7 808 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 CPZQ66K79 652 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 CD300LDQ6UXZ3 194 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 ETV3LQ6ZN32 361 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 ZNF654Q8IZM8 581 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 OR6P1Q8NGX9 317 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 PLEKHO2Q8TD55 490 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 C8orf49Q96NF6 230 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 TMX1Q9H3N1 280 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 GPRC5CQ9NQ84 441 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 APEX2Q9UBZ4 518 aa4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB3P15-201ENST00000507326 SGSM2O43147 1006 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 SH3BP5O60239 455 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 ZNF20P17024 532 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 CALRP27797 417 aaKnown RBP4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 IRX6P78412 446 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 ZXDAP98168 799 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 MCTP2Q6DN12 878 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 KIAA1211LQ6NV74 962 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 ZNF513Q8N8E2 541 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 KYQ8NBH2 561 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 DPF3Q92784 378 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 ARMC5Q96C12 935 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 MMP19Q99542 508 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 BRINP2Q9C0B6 783 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 AP5M1Q9H0R1 490 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 PCDH18Q9HCL0 1135 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 TERF2IPQ9NYB0 399 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 INVSQ9Y283 1065 aa4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 NOP58Q9Y2X3 529 aaKnown RBP4.68□□□□□ -1.66
HMGB3P15-201ENST00000507326 ANKRD34BA5PLL1 514 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 ANP32CO43423 234 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 AKAP8O43823 692 aaKnown RBP4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 THBDP07204 575 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms