RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CCDC152Q4G0S7 254 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 PREPLQ4J6C6 727 aaPredicted RBP19.61■□□□□ 0.73
NUP54-205ENST00000507257 SBK1Q52WX2 424 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 HGSNATQ68CP4 663 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 KCTD16Q68DU8 428 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 GUF1Q8N442 669 aaKnown RBP19.61■□□□□ 0.73
NUP54-205ENST00000507257 INPP4AQ96PE3 977 aaPredicted RBP19.61■□□□□ 0.73
NUP54-205ENST00000507257 HINFPQ9BQA5 517 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 EHD2Q9NZN4 543 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 FAM153AQ9UHL3 310 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 PCDHGC5Q9Y5F6 944 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 PVALEFA0A1B0GWK0 134 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 GUCY1A3Q02108 690 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 GUCY2DQ02846 1103 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 NAB2Q15742 525 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 CCDC40Q4G0X9 1142 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 RCSD1Q6JBY9 416 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 ARMC9Q7Z3E5 817 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 KLC4Q9NSK0 619 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 SMARCAL1Q9NZC9 954 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 TMEM59LQ9UK28 342 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 USP17L12C9JPN9 530 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 BHMG1C9JSJ3 638 aaPredicted RBP19.6■□□□□ 0.73
NUP54-205ENST00000507257 USP17L21D6R901 530 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 NCK2O43639 380 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 OR52Z1P0C646 297 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 TNNC1P63316 161 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 WLSQ5T9L3 541 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 RRAGAQ7L523 313 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
NUP54-205ENST00000507257 CCDC50Q8IVM0 306 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 CASKIN2Q8WXE0 1202 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 P3H4Q92791 437 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 FAM207AQ9NSI2 230 aaPredicted RBP19.6■□□□□ 0.73
NUP54-205ENST00000507257 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
NUP54-205ENST00000507257 PHLPP1O60346 1717 aa19.6■□□□□ 0.73
NUP54-205ENST00000507257 DYNLL1P63167 89 aaKnown RBP19.59■□□□□ 0.73
NUP54-205ENST00000507257 CHRNDQ07001 517 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 BIRC3Q13489 604 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 CUL1Q13616 776 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 NEDD9Q14511 834 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 MEI1Q5TIA1 1274 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 DGKHQ86XP1 1220 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 CCDC13Q8IYE1 715 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 ZKSCAN4Q969J2 545 aaPredicted RBP19.59■□□□□ 0.73
NUP54-205ENST00000507257 ATAD5Q96QE3 1844 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 ISCUQ9H1K1 167 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 MMRN2Q9H8L6 949 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 ATP8A2Q9NTI2 1148 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 ABCF2Q9UG63 623 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 ZBTB1Q9Y2K1 713 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 BTNL10A8MVZ5 291 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 PAEPP09466 180 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 FCER1AP12319 257 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 MRPS25P82663 173 aaKnown RBP19.59■□□□□ 0.73
NUP54-205ENST00000507257 RASSF7Q02833 373 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 GRM4Q14833 912 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 SLC9C1Q4G0N8 1177 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 UNC13DQ70J99 1090 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 TAF1DQ9H5J8 278 aaPredicted RBP19.59■□□□□ 0.73
NUP54-205ENST00000507257 CEP72Q9P209 647 aa19.59■□□□□ 0.73
NUP54-205ENST00000507257 ARPP21Q9UBL0 812 aaPredicted RBP19.59■□□□□ 0.73
NUP54-205ENST00000507257 GOLGA6L7A0A1B0GV03 622 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 C5orf60A6NFR6 353 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 GOLGA6L10A6NI86 522 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 SERPING1P05155 500 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 RDXP35241 583 aaKnown RBP19.58■□□□□ 0.72
NUP54-205ENST00000507257 SLC1A4P43007 532 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 HDLBPQ00341 1268 aaKnown RBP19.58■□□□□ 0.72
NUP54-205ENST00000507257 TXNRD1Q16881 649 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 INF2Q27J81 1249 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 PROM2Q8N271 834 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 MS4A14Q96JA4 679 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 PSMB7Q99436 277 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 BARHL2Q9NY43 387 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 STK17AQ9UEE5 414 aa19.58■□□□□ 0.72
NUP54-205ENST00000507257 NKRFO15226 690 aaKnown RBP eCLIP19.57■□□□□ 0.72
NUP54-205ENST00000507257 PSEN1P49768 467 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 GFPT1Q06210 699 aaPredicted RBP19.57■□□□□ 0.72
NUP54-205ENST00000507257 PARP10Q53GL7 1025 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 CADPS2Q86UW7 1296 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 USP38Q8NB14 1042 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 RASGRP4Q8TDF6 673 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 LRRC45Q96CN5 670 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 CYFIP2Q96F07 1278 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 JPH2Q9BR39 696 aaPredicted RBP19.57■□□□□ 0.72
NUP54-205ENST00000507257 SLC12A6Q9UHW9 1150 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 MAST2Q6P0Q8 1798 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 NMT2O60551 498 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 UBE4AQ14139 1066 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 AGBL2Q5U5Z8 902 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 SUSD4Q5VX71 490 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 RUFY4Q6ZNE9 571 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 LRRC55Q6ZSA7 311 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 KRT25Q7Z3Z0 450 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 IFT81Q8WYA0 676 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 GPKOWQ92917 476 aaPredicted RBP eCLIP19.57■□□□□ 0.721e-10■■■□□ 14.7
NUP54-205ENST00000507257 RIC8AQ9NPQ8 531 aa19.57■□□□□ 0.72
NUP54-205ENST00000507257 MCM8Q9UJA3 840 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms