RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MYO10Q9HD67 2058 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 NDUFB10O96000 172 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 RB1P06400 928 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 PDE4BQ07343 736 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 COASYQ13057 564 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 OS9Q13438 667 aaPredicted RBP8.66□□□□□ -1.02
VCAN-207ENST00000507162 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
VCAN-207ENST00000507162 NSMFQ6X4W1 530 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 DCLK2Q8N568 766 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 TOP1MTQ969P6 601 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 PPP2R3CQ969Q6 453 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 CHMP4CQ96CF2 233 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 IL17RAQ96F46 866 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 CTAGE1Q96RT6 745 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 MEIS3Q99687 375 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 CLIP2Q9UDT6 1046 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 FPGT-TNNI3KV9GXZ4 949 aa8.66□□□□□ -1.02
VCAN-207ENST00000507162 FLNBO75369 2602 aaKnown RBP8.65□□□□□ -1.02
VCAN-207ENST00000507162 PRKAB2O43741 272 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 NRIP1P48552 1158 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 OAZ1P54368 228 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 SNAP25P60880 206 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 MBTPS1Q14703 1052 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 ANGPT1Q15389 498 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 CCDC184Q52MB2 194 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 MUM1L1Q5H9M0 696 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 ADGRD2Q7Z7M1 963 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 STK11IPQ8N1F8 1099 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 FLCNQ8NFG4 579 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 CYP2W1Q8TAV3 490 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 ALG1Q9BT22 464 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 IFIH1Q9BYX4 1025 aaKnown RBP8.65□□□□□ -1.02
VCAN-207ENST00000507162 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
VCAN-207ENST00000507162 TSHZ2Q9NRE2 1034 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 FEM1BQ9UK73 627 aa8.65□□□□□ -1.02
VCAN-207ENST00000507162 ZFYVE26Q68DK2 2539 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 MYO5AQ9Y4I1 1855 aaKnown RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 OTOGLQ3ZCN5 2332 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 PARP14Q460N5 1801 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 A6NJR5 290 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 TXNP10599 105 aaKnown RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 CLCN5P51795 746 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 ZNF200P98182 395 aaPredicted RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 IKQ13123 557 aaPredicted RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 PTK7Q13308 1070 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 COL9A3Q14050 684 aaPredicted RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 PPP2R5BQ15173 497 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 SLC9C2Q5TAH2 1124 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 AMOTL1Q8IY63 956 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 LRRC47Q8N1G4 583 aaKnown RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 EFHBQ8N7U6 833 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 C7orf31Q8N865 590 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 ZNF512BQ96KM6 892 aaPredicted RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 HAUS7Q99871 368 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 APOL5Q9BWW9 433 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 ARMT1Q9H993 441 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 SH2B1Q9NRF2 756 aaPredicted RBP8.64□□□□□ -1.03
VCAN-207ENST00000507162 CYP39A1Q9NYL5 469 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 HDAC6Q9UBN7 1215 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 R4GN57 208 aa8.64□□□□□ -1.03
VCAN-207ENST00000507162 SCN10AQ9Y5Y9 1956 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 RBM47A0AV96 593 aaKnown RBP8.63□□□□□ -1.03
VCAN-207ENST00000507162 RSPH10B2B2RC85 870 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 TMEM232C9JQI7 657 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 C5orf67F2Z3F1 127 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.03
VCAN-207ENST00000507162 PI15O43692 258 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 BRD1O95696 1058 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 RSPH10BP0C881 870 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 HOXB3P14651 431 aaPredicted RBP8.63□□□□□ -1.03
VCAN-207ENST00000507162 ATF7P17544 494 aaPredicted RBP8.63□□□□□ -1.03
VCAN-207ENST00000507162 THPOP40225 353 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
VCAN-207ENST00000507162 MTMR3Q13615 1198 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 TKFCQ3LXA3 575 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 C12orf60Q5U649 245 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 TRAF7Q6Q0C0 670 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 C16orf86Q6ZW13 317 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 CHST3Q7LGC8 479 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 UBALD2Q8IYN6 164 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 LCORLQ8N3X6 602 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 MICAL1Q8TDZ2 1067 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 AFG1LQ8WV93 481 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 SEPT8Q92599 483 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 WNT8BQ93098 351 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.63□□□□□ -1.03
VCAN-207ENST00000507162 SEMA4AQ9H3S1 761 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 SMOC2Q9H3U7 446 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 TLE6Q9H808 572 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 NYAP2Q9P242 653 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 GTF2IRD1Q9UHL9 959 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 PLAGL2Q9UPG8 496 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 MICAL3Q7RTP6 2002 aa8.63□□□□□ -1.03
VCAN-207ENST00000507162 EMSYQ7Z589 1322 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 ZNF532Q9HCE3 1301 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 DCDC2BA2VCK2 349 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 PER2O15055 1255 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 GNAI3P08754 354 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms