RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 LZTS2Q9BRK4 669 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 MTG1Q9BT17 334 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 NOC4LQ9BVI4 516 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 ALDH8A1Q9H2A2 487 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 MTMR10Q9NXD2 777 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 DDX41Q9UJV9 622 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 CCDC69A6NI79 296 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 GCOM1H8Y6P7 765 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 PLEKHA8P1O95397 391 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 GH1P01241 217 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 MMP3P08254 477 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 MYL3P08590 195 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 POLR2MP0CAP2 368 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 CALM1P0DP23 149 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 CALM2P0DP24 149 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 CALM3P0DP25 149 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 CSF2RAP15509 400 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 GNAQP50148 359 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 EXOSC10Q01780 885 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 PPIGQ13427 754 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 PGM5Q15124 567 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 BRDTQ58F21 947 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 RASIP1Q5U651 963 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 SRBD1Q8N5C6 995 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 IL31RAQ8NI17 732 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 AFG1LQ8WV93 481 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 KCNB2Q92953 911 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.5□□□□□ -0.736e-6■■□□□ 11.7
PDLIM5-209ENST00000506632 LRRC2Q9BYS8 371 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 TRPV6Q9H1D0 765 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 HIPK3Q9H422 1215 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 UMODL1Q5DID0 1318 aa10.5□□□□□ -0.73
PDLIM5-209ENST00000506632 HOXD8P13378 290 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 RXRAP19793 462 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 CYP2C18P33260 490 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 NBPF20Q3BBV1 942 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 ADCK5Q3MIX3 580 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 TMEM240Q5SV17 173 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 NFRKBQ6P4R8 1299 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 APOA5Q6Q788 366 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 NFXL1Q6ZNB6 911 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 TMTC3Q6ZXV5 915 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 TMEM199Q8N511 208 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 FANCBQ8NB91 859 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 KAT2BQ92831 832 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 VWCEQ96DN2 955 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 RRP36Q96EU6 259 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 RNPC3Q96LT9 517 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 NEK1Q96PY6 1258 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 WNT8AQ9H1J5 351 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 SLC12A7Q9Y666 1083 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 MRVI1Q9Y6F6 885 aa10.49□□□□□ -0.73
PDLIM5-209ENST00000506632 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 MEIS2O14770 477 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 SUPT20HL2P0C7V6 817 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 TGFB3P10600 412 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 MYCLP12524 364 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 CCND2P30279 289 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 PSRC1Q6PGN9 363 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 KCNV1Q6PIU1 500 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 DHX32Q7L7V1 743 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 SESTD1Q86VW0 696 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 CMTR1Q8N1G2 835 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 PPTC7Q8NI37 304 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 PIBF1Q8WXW3 757 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 INPP4AQ96PE3 977 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 IL23AQ9NPF7 189 aa10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 TRMT13Q9NUP7 481 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-209ENST00000506632 HAS3O00219 553 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 STAM2O75886 525 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 CYP2C9P11712 490 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 UBA1P22314 1058 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 ICAM3P32942 547 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 HSPA4P34932 840 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 MRPS9P82933 396 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 SP2Q02086 613 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 FUT2Q10981 343 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 KRT32Q14532 448 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 DGKDQ16760 1214 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 CELF3Q5SZQ8 465 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 USP17L6PQ6QN14 398 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 MICU3Q86XE3 530 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 RAB11FIP4Q86YS3 637 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 GPKOWQ92917 476 aaPredicted RBP eCLIP10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 TCEANC2Q96MN5 208 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 GUCD1Q96NT3 240 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 CTAGE1Q96RT6 745 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 BRPF3Q9ULD4 1205 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 CNTNAP5Q8WYK1 1306 aa10.47□□□□□ -0.73
PDLIM5-209ENST00000506632 MYH7BA7E2Y1 1941 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms