RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 SAMD3Q8N6K7 520 aa16.7■□□□□ 0.26
CDC42SE2-209ENST00000506419 EYSQ5T1H1 3165 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 SH2B2O14492 632 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 MMP3P08254 477 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 POLR2MP0CAP2 368 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 SP2Q02086 613 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 GRIN2CQ14957 1233 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 FAM47CQ5HY64 1035 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 OTOP2Q7RTS6 562 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 FCHSD1Q86WN1 690 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 ZNF654Q8IZM8 581 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 MYLIPQ8WY64 445 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 GPKOWQ92917 476 aaPredicted RBP eCLIP16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 CTAGE1Q96RT6 745 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 MAP3K14Q99558 947 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 BCAS3Q9H6U6 928 aa16.69■□□□□ 0.26
CDC42SE2-209ENST00000506419 UNC80Q8N2C7 3258 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 RBAK-RBAKDNI3L0D1 243 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 DNAJB2P25686 324 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 CHMP4BP1P59074 171 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 PGM5Q15124 567 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 CENPQQ7L2Z9 268 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 SRBD1Q8N5C6 995 aaKnown RBP16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 MTA3Q9BTC8 594 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 PBX4Q9BYU1 374 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 MRVI1Q9Y6F6 885 aa16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
CDC42SE2-209ENST00000506419 SORBS3O60504 671 aa16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 MCM5P33992 734 aa16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 PTPN11Q06124 597 aaPredicted RBP16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 LAMC2Q13753 1193 aa16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 BMP2KLQ5H9B9 411 aa16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 CASC1Q6TDU7 716 aa16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 DHX37Q8IY37 1157 aaKnown RBP16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 RPUSD2Q8IZ73 545 aaKnown RBP16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 CMTR1Q8N1G2 835 aaKnown RBP16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 EMID1Q96A84 441 aaPredicted RBP16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 CHD9Q3L8U1 2897 aa16.67■□□□□ 0.26
CDC42SE2-209ENST00000506419 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 DDAH1O94760 285 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 RXRAP19793 462 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 SMARCA1P28370 1054 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 LIFRP42702 1097 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 MRPS9P82933 396 aaKnown RBP16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 TRAF1Q13077 416 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 CELF3Q5SZQ8 465 aaKnown RBP16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 MYSM1Q5VVJ2 828 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 GDF6Q6KF10 455 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 TMTC2Q8N394 836 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 PRUNE2Q8WUY3 3088 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 TIFAQ96CG3 184 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 TMEM87BQ96K49 555 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 SPZ1Q9BXG8 430 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 ZNF576Q9H609 170 aa16.66■□□□□ 0.26
CDC42SE2-209ENST00000506419 IQCF3P0C7M6 154 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 GPNMBQ14956 572 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 DGKDQ16760 1214 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 HSDL1Q3SXM5 330 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 USP17L6PQ6QN14 398 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 DEFB128Q7Z7B8 93 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 SESTD1Q86VW0 696 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 PPTC7Q8NI37 304 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 CTCFLQ8NI51 663 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 HDAC6Q9UBN7 1215 aa16.65■□□□□ 0.26
CDC42SE2-209ENST00000506419 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 HAS3O00219 553 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 DLL1O00548 723 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 MEIS2O14770 477 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 HOXD8P13378 290 aaPredicted RBP16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 CCND2P30279 289 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 PSEN2P49810 448 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 HIC1Q14526 733 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 PTGISQ16647 500 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 NFXL1Q6ZNB6 911 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 DHX38Q92620 1227 aaKnown RBP16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 RTEL1Q9NZ71 1219 aa16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 YBX2Q9Y2T7 364 aaKnown RBP16.64■□□□□ 0.25
CDC42SE2-209ENST00000506419 hCG_1642624A0A1W2PR95 340 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 CCDC69A6NI79 296 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 PPFIA4O75335 1185 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 GGPS1O95749 300 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 TGFB3P10600 412 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 UBA1P22314 1058 aaKnown RBP16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 KIF5BP33176 963 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 RABGGTBP53611 331 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 ZNF200P98182 395 aaPredicted RBP16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms