RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SLKQ9H2G2 1235 aaPredicted RBP19.16■□□□□ 0.66
SNCA-209ENST00000506244 RIC8AQ9NPQ8 531 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 GTF3C3Q9Y5Q9 886 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 ESYT2A0FGR8 921 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 DYNC1LI2O43237 492 aaPredicted RBP19.15■□□□□ 0.66
SNCA-209ENST00000506244 NEK4P51957 841 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 SSRP1Q08945 709 aaKnown RBP19.15■□□□□ 0.66
SNCA-209ENST00000506244 STK3Q13188 491 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 KCNA10Q16322 511 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 VSIG10LQ86VR7 867 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 OR6J1Q8NGC5 347 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 C22orf23Q9BZE7 217 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 STARD7Q9NQZ5 370 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 MRVI1Q9Y6F6 885 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 ALPK3Q96L96 1907 aa19.15■□□□□ 0.66
SNCA-209ENST00000506244 MYADML2A6NDP7 307 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 CABYRO75952 493 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 FOSP01100 380 aaPredicted RBP19.14■□□□□ 0.65
SNCA-209ENST00000506244 ASGR1P07306 291 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 AP3B2Q13367 1082 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 LRRC26Q2I0M4 334 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 C1orf53Q5VUE5 145 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 PCNX4Q63HM2 1172 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 MCTP2Q6DN12 878 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 CCSAPQ6IQ19 270 aaPredicted RBP19.14■□□□□ 0.65
SNCA-209ENST00000506244 IL31RAQ8NI17 732 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 FERMT2Q96AC1 680 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 ELP1O95163 1332 aa19.14■□□□□ 0.65
SNCA-209ENST00000506244 SMCO2A6NFE2 343 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 PFKFB2O60825 505 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 DEXIO95424 95 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 GH1P01241 217 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 GNA11P29992 359 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 RBM25P49756 843 aaKnown RBP19.13■□□□□ 0.65
SNCA-209ENST00000506244 ATN1P54259 1190 aaPredicted RBP19.13■□□□□ 0.65
SNCA-209ENST00000506244 SNX17Q15036 470 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 UBE2SQ16763 222 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 TYW1BQ6NUM6 668 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 SLC39A5Q6ZMH5 540 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 C7orf61Q8IZ16 206 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 FAM177A1Q8N128 213 aaPredicted RBP19.13■□□□□ 0.65
SNCA-209ENST00000506244 BICD2Q8TD16 824 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 LARP6Q9BRS8 491 aaKnown RBP19.13■□□□□ 0.65
SNCA-209ENST00000506244 C6orf50Q9HD87 102 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 POLR3EQ9NVU0 708 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 TPCN1Q9ULQ1 816 aa19.13■□□□□ 0.65
SNCA-209ENST00000506244 MROH7Q68CQ1 1323 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 STK36Q9NRP7 1315 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 CTAGE5O15320 804 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 TGFB3P10600 412 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 RTP1P59025 263 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 BEX3Q00994 111 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 SCRN1Q12765 414 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 PKN1Q16512 942 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 CCDC62Q6P9F0 684 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 IL27Q8NEV9 243 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 INPP4AQ96PE3 977 aaPredicted RBP19.12■□□□□ 0.65
SNCA-209ENST00000506244 ZMYND12Q9H0C1 365 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 SH3GLB2Q9NR46 395 aa19.12■□□□□ 0.65
SNCA-209ENST00000506244 A0A0U1RQG5 324 aaPredicted RBP19.11■□□□□ 0.65
SNCA-209ENST00000506244 KPNA6O60684 536 aa19.11■□□□□ 0.65
SNCA-209ENST00000506244 ARIH2O95376 493 aa19.11■□□□□ 0.65
SNCA-209ENST00000506244 NLRX1Q86UT6 975 aa19.11■□□□□ 0.65
SNCA-209ENST00000506244 REXO1Q8N1G1 1221 aaKnown RBP19.11■□□□□ 0.65
SNCA-209ENST00000506244 EMID1Q96A84 441 aaPredicted RBP19.11■□□□□ 0.65
SNCA-209ENST00000506244 CDHR1Q96JP9 859 aa19.11■□□□□ 0.65
SNCA-209ENST00000506244 SEZ6LQ9BYH1 1024 aa19.11■□□□□ 0.65
SNCA-209ENST00000506244 DDX41Q9UJV9 622 aaKnown RBP19.11■□□□□ 0.65
SNCA-209ENST00000506244 PCDHA6Q9UN73 950 aa19.11■□□□□ 0.65
SNCA-209ENST00000506244 PCDHA8Q9Y5H6 950 aa19.11■□□□□ 0.65
SNCA-209ENST00000506244 FIBPO43427 364 aa19.1■□□□□ 0.65
SNCA-209ENST00000506244 LY6KQ17RY6 165 aa19.1■□□□□ 0.65
SNCA-209ENST00000506244 VTI1AQ96AJ9 217 aa19.1■□□□□ 0.65
SNCA-209ENST00000506244 PRKAG2Q9UGJ0 569 aa19.1■□□□□ 0.65
SNCA-209ENST00000506244 ATP11BQ9Y2G3 1177 aa19.1■□□□□ 0.65
SNCA-209ENST00000506244 A6NJR5 290 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 H0YGN5 161 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 RGS20O76081 388 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 XBP1P17861 261 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 ICAM3P32942 547 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 IRX5P78411 483 aaPredicted RBP19.09■□□□□ 0.65
SNCA-209ENST00000506244 MRPS9P82933 396 aaKnown RBP19.09■□□□□ 0.65
SNCA-209ENST00000506244 ARHGAP1Q07960 439 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 LAMC2Q13753 1193 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 RABEP1Q15276 862 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 TRIM60Q495X7 471 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 TMEM63BQ5T3F8 832 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 WASF1Q92558 559 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 COPS5Q92905 334 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 GTF3C6Q969F1 213 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 GPRASP2Q96D09 838 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 ANO3Q9BYT9 981 aa19.09■□□□□ 0.65
SNCA-209ENST00000506244 PPFIA3O75145 1194 aa19.08■□□□□ 0.64
SNCA-209ENST00000506244 UBA1P22314 1058 aaKnown RBP19.08■□□□□ 0.64
SNCA-209ENST00000506244 PTGS1P23219 599 aa19.08■□□□□ 0.64
SNCA-209ENST00000506244 CLK2P49760 499 aaKnown RBP19.08■□□□□ 0.64
SNCA-209ENST00000506244 NEDD9Q14511 834 aa19.08■□□□□ 0.64
SNCA-209ENST00000506244 CXCL17Q6UXB2 119 aa19.08■□□□□ 0.64
SNCA-209ENST00000506244 DHX37Q8IY37 1157 aaKnown RBP19.08■□□□□ 0.64
SNCA-209ENST00000506244 PPTC7Q8NI37 304 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms