RNA–Protein interactions for RNA: ENST00000505883.1

MBD4-205, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-205ENST00000505883 CCND2P30279 289 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 NAPAP54920 295 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 SNX17Q15036 470 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 UBE2SQ16763 222 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 LY6KQ17RY6 165 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 OR6J1Q8NGC5 347 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 PHKBQ93100 1093 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 STARD7Q9NQZ5 370 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 BARHL2Q9NY43 387 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 ZMYND8Q9ULU4 1186 aaPredicted RBP18.9■□□□□ 0.62
MBD4-205ENST00000505883 ATP11BQ9Y2G3 1177 aa18.9■□□□□ 0.62
MBD4-205ENST00000505883 NKRFO15226 690 aaKnown RBP eCLIP18.89■□□□□ 0.61
MBD4-205ENST00000505883 PRPF3O43395 683 aaKnown RBP18.89■□□□□ 0.61
MBD4-205ENST00000505883 RGS20O76081 388 aa18.89■□□□□ 0.61
MBD4-205ENST00000505883 STK3Q13188 491 aa18.89■□□□□ 0.61
MBD4-205ENST00000505883 PFKFB3Q16875 520 aaPredicted RBP18.89■□□□□ 0.61
MBD4-205ENST00000505883 TRIM60Q495X7 471 aa18.89■□□□□ 0.61
MBD4-205ENST00000505883 PPP1R18Q6NYC8 613 aa18.89■□□□□ 0.61
MBD4-205ENST00000505883 GLT1D1Q96MS3 346 aa18.89■□□□□ 0.61
MBD4-205ENST00000505883 ALDH8A1Q9H2A2 487 aaPredicted RBP18.89■□□□□ 0.61
MBD4-205ENST00000505883 FRMPD4Q14CM0 1322 aa18.89■□□□□ 0.61
MBD4-205ENST00000505883 hCG_1984214I3L0E3 225 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 ZEB2O60315 1214 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 SCG2P13521 617 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 IFNAR1P17181 557 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 SYN1P17600 705 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 MRPS9P82933 396 aaKnown RBP18.88■□□□□ 0.61
MBD4-205ENST00000505883 PKN1Q16512 942 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 C1orf53Q5VUE5 145 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 CXCL17Q6UXB2 119 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 ZNF713Q8N859 430 aaPredicted RBP18.88■□□□□ 0.61
MBD4-205ENST00000505883 VTI1AQ96AJ9 217 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 SLC26A6Q9BXS9 759 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 PCDH10Q9P2E7 1040 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 DDX41Q9UJV9 622 aaKnown RBP18.88■□□□□ 0.61
MBD4-205ENST00000505883 MRVI1Q9Y6F6 885 aa18.88■□□□□ 0.61
MBD4-205ENST00000505883 SMCO2A6NFE2 343 aa18.87■□□□□ 0.61
MBD4-205ENST00000505883 ELP1O95163 1332 aa18.87■□□□□ 0.61
MBD4-205ENST00000505883 CPT1AP50416 773 aa18.87■□□□□ 0.61
MBD4-205ENST00000505883 AK2P54819 239 aa18.87■□□□□ 0.61
MBD4-205ENST00000505883 AKAP17AQ02040 695 aaKnown RBP18.87■□□□□ 0.61
MBD4-205ENST00000505883 ALPK3Q96L96 1907 aa18.87■□□□□ 0.61
MBD4-205ENST00000505883 RIC8AQ9NPQ8 531 aa18.87■□□□□ 0.61
MBD4-205ENST00000505883 TPCN1Q9ULQ1 816 aa18.87■□□□□ 0.61
MBD4-205ENST00000505883 GH1P01241 217 aa18.86■□□□□ 0.61
MBD4-205ENST00000505883 ADCY7P51828 1080 aa18.86■□□□□ 0.61
MBD4-205ENST00000505883 TLE2Q04725 743 aa18.86■□□□□ 0.61
MBD4-205ENST00000505883 ARHGAP1Q07960 439 aa18.86■□□□□ 0.61
MBD4-205ENST00000505883 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
MBD4-205ENST00000505883 RTEL1Q9NZ71 1219 aa18.86■□□□□ 0.61
MBD4-205ENST00000505883 RBM27Q9P2N5 1060 aaKnown RBP18.86■□□□□ 0.61
MBD4-205ENST00000505883 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
MBD4-205ENST00000505883 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
MBD4-205ENST00000505883 A6NJR5 290 aa18.85■□□□□ 0.61
MBD4-205ENST00000505883 SPDYE3A6NKU9 549 aa18.85■□□□□ 0.61
MBD4-205ENST00000505883 CPLX1O14810 134 aa18.85■□□□□ 0.61
MBD4-205ENST00000505883 PQBP1O60828 265 aaKnown RBP18.85■□□□□ 0.61
MBD4-205ENST00000505883 CABYRO75952 493 aa18.85■□□□□ 0.61
MBD4-205ENST00000505883 NEK4P51957 841 aa18.85■□□□□ 0.61
MBD4-205ENST00000505883 ANKRD1Q15327 319 aa18.85■□□□□ 0.61
MBD4-205ENST00000505883 PCNX4Q63HM2 1172 aa18.85■□□□□ 0.61
MBD4-205ENST00000505883 A0A0U1RQG5 324 aaPredicted RBP18.84■□□□□ 0.61
MBD4-205ENST00000505883 STAM2O75886 525 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 MYL3P08590 195 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 CDK7P50613 346 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 PURAQ00577 322 aaKnown RBP18.84■□□□□ 0.61
MBD4-205ENST00000505883 SP2Q02086 613 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 SCRN1Q12765 414 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 BRDTQ58F21 947 aaPredicted RBP18.84■□□□□ 0.61
MBD4-205ENST00000505883 XRRA1Q6P2D8 792 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 KCNV1Q6PIU1 500 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 CHRDL2Q6WN34 429 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 AFG1LQ8WV93 481 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 INPP4AQ96PE3 977 aaPredicted RBP18.84■□□□□ 0.61
MBD4-205ENST00000505883 SLKQ9H2G2 1235 aaPredicted RBP18.84■□□□□ 0.61
MBD4-205ENST00000505883 POLR3EQ9NVU0 708 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 TMEM260Q9NX78 707 aa18.84■□□□□ 0.61
MBD4-205ENST00000505883 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
MBD4-205ENST00000505883 GRIN2DO15399 1336 aa18.83■□□□□ 0.61
MBD4-205ENST00000505883 ARVCFO00192 962 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 SORBS3O60504 671 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 PFKFB2O60825 505 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 TGFB3P10600 412 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 PSMC6P62333 389 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
MBD4-205ENST00000505883 GNPTABQ3T906 1256 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 ANKRD33Q7Z3H0 272 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 TEX2Q8IWB9 1127 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 DHX37Q8IY37 1157 aaKnown RBP18.83■□□□□ 0.6
MBD4-205ENST00000505883 TRIM22Q8IYM9 498 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 PGBD1Q96JS3 809 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 ZMYND12Q9H0C1 365 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 GLT8D2Q9H1C3 349 aa18.83■□□□□ 0.6
MBD4-205ENST00000505883 PRDM5Q9NQX1 630 aaPredicted RBP18.83■□□□□ 0.6
MBD4-205ENST00000505883 SPATA31C2B4DYI2 1134 aa18.82■□□□□ 0.6
MBD4-205ENST00000505883 ADAMTS3O15072 1205 aa18.82■□□□□ 0.6
MBD4-205ENST00000505883 UBA1P22314 1058 aaKnown RBP18.82■□□□□ 0.6
MBD4-205ENST00000505883 ICAM3P32942 547 aa18.82■□□□□ 0.6
MBD4-205ENST00000505883 CLK2P49760 499 aaKnown RBP18.82■□□□□ 0.6
MBD4-205ENST00000505883 SEMA3FQ13275 785 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms