RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RNPC3Q96LT9 517 aaKnown RBP5.89□□□□□ -1.47
CHD1-203ENST00000505657 CDIP1Q9H305 208 aa5.89□□□□□ -1.47
CHD1-203ENST00000505657 GPR27Q9NS67 375 aa5.89□□□□□ -1.47
CHD1-203ENST00000505657 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.89□□□□□ -1.47
CHD1-203ENST00000505657 CYBBP04839 570 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 MPOP05164 745 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 CBX2Q14781 532 aaPredicted RBP5.88□□□□□ -1.47
CHD1-203ENST00000505657 WWC2Q6AWC2 1192 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 CEP68Q76N32 757 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 TMC6Q7Z403 805 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 FBXO15Q8NCQ5 510 aaPredicted RBP5.88□□□□□ -1.47
CHD1-203ENST00000505657 ZSWIM2Q8NEG5 633 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 CHAMP1Q96JM3 812 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 SGPP1Q9BX95 441 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 BCAS3Q9H6U6 928 aa5.88□□□□□ -1.47
CHD1-203ENST00000505657 ESYT3A0FGR9 886 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 MYO1BO43795 1136 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 TMEM253P0C7T8 217 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 CTSWP56202 376 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 LSAMPQ13449 338 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 PAQR3Q6TCH7 311 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 LBX2Q6XYB7 198 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 USP33Q8TEY7 942 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 SLC26A8Q96RN1 970 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 SLC52A2Q9HAB3 445 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 GCM1Q9NP62 436 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 CLDND1Q9NY35 253 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 MBD1Q9UIS9 605 aaPredicted RBP5.87□□□□□ -1.47
CHD1-203ENST00000505657 MRPL42Q9Y6G3 142 aaKnown RBP5.87□□□□□ -1.47
CHD1-203ENST00000505657 X6R8D5 127 aa5.87□□□□□ -1.47
CHD1-203ENST00000505657 F8W031 263 aaPredicted RBP5.86□□□□□ -1.47
CHD1-203ENST00000505657 MAPKAPK2P49137 400 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 GPR85P60893 370 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
CHD1-203ENST00000505657 PRR5P85299 388 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 KCNA10Q16322 511 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 RSPO2Q6UXX9 243 aaPredicted RBP5.86□□□□□ -1.47
CHD1-203ENST00000505657 NETO2Q8NC67 525 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 TRMT2BQ96GJ1 504 aaKnown RBP5.86□□□□□ -1.47
CHD1-203ENST00000505657 TMEM169Q96HH4 297 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 C20orf173Q96LM9 149 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 JAM3Q9BX67 310 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
CHD1-203ENST00000505657 HRKO00198 91 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 PEX10O60683 326 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 CDR1P51861 262 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 GTF2A2P52657 109 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 EPHB3P54753 998 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 ZNF200P98182 395 aaPredicted RBP5.85□□□□□ -1.47
CHD1-203ENST00000505657 NR1I3Q14994 352 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 ZC3H12BQ5HYM0 836 aaKnown RBP5.85□□□□□ -1.47
CHD1-203ENST00000505657 ATG14Q6ZNE5 492 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 MAMDC2Q7Z304 686 aaPredicted RBP5.85□□□□□ -1.47
CHD1-203ENST00000505657 CABP7Q86V35 215 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 IFNL3Q8IZI9 196 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.85□□□□□ -1.47
CHD1-203ENST00000505657 SLC7A14Q8TBB6 771 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 PTPRN2Q92932 1015 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 CLUHP3Q96NS8 147 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 IPO9Q96P70 1041 aaKnown RBP5.85□□□□□ -1.47
CHD1-203ENST00000505657 ZFYVE21Q9BQ24 234 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 NCOA5Q9HCD5 579 aaKnown RBP5.85□□□□□ -1.47
CHD1-203ENST00000505657 CD320Q9NPF0 282 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 TMEM260Q9NX78 707 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 NDOR1Q9UHB4 597 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 JAG2Q9Y219 1238 aa5.85□□□□□ -1.47
CHD1-203ENST00000505657 TEX51A0A1B0GUA7 166 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 H7BY64 318 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
CHD1-203ENST00000505657 PPP1R12AO14974 1030 aaPredicted RBP5.84□□□□□ -1.47
CHD1-203ENST00000505657 SGSM2O43147 1006 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 HOXA5P20719 270 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 FBLN1P23142 703 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 GRK2P25098 689 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 GRK3P35626 688 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 NCKAP1LP55160 1127 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 GABREP78334 506 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 GIMAP6Q6P9H5 292 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 ZC3H14Q6PJT7 736 aaKnown RBP5.84□□□□□ -1.47
CHD1-203ENST00000505657 RIOX2Q8IUF8 465 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 GSTCDQ8NEC7 633 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 SCLYQ96I15 445 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 IPPKQ9H8X2 491 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 TBX22Q9Y458 520 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 PCDHA9Q9Y5H5 950 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 PCDHA8Q9Y5H6 950 aa5.84□□□□□ -1.47
CHD1-203ENST00000505657 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.83□□□□□ -1.48
CHD1-203ENST00000505657 RASGRP1O95267 797 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 RAPGEF3O95398 923 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 SOD2P04179 222 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 KIZQ2M2Z5 673 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 TKFCQ3LXA3 575 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 TRIM61Q5EBN2 209 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 MROH9Q5TGP6 573 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 CIAPIN1Q6FI81 312 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 BRAPQ7Z569 592 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 FGD2Q7Z6J4 655 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 MTDHQ86UE4 582 aaKnown RBP5.83□□□□□ -1.48
CHD1-203ENST00000505657 NLGN1Q8N2Q7 840 aa5.83□□□□□ -1.48
CHD1-203ENST00000505657 TSPAN17Q96FV3 270 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms