RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PCDHB12Q9Y5F1 795 aa5.13□□□□□ -1.59
TRAPPC13-208ENST00000505553 FHOD1Q9Y613 1164 aa5.13□□□□□ -1.59
TRAPPC13-208ENST00000505553 SHTN1A0MZ66 631 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 FAM83GA6ND36 823 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 PRR33A8MZF0 331 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 AQP7O14520 342 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 TBX1O43435 398 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 KPNA6O60684 536 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 TRIM13O60858 407 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 KCNH1O95259 989 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 CBX7O95931 251 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 KRT18P05783 430 aaKnown RBP5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 JMJD7P0C870 316 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 GNALP38405 381 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 KCNJ6P48051 423 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 SCNN1BP51168 640 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 GRB10Q13322 594 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 MTMR1Q13613 665 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 PCBP1Q15365 356 aaKnown RBP eCLIP5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 PASD1Q8IV76 773 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 MYO1HQ8N1T3 1032 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 ADCY4Q8NFM4 1077 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 SYTL5Q8TDW5 730 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 BTN2A2Q8WVV5 523 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 MTMR8Q96EF0 704 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 COX4I2Q96KJ9 171 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 KREMEN1Q96MU8 473 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 LGR4Q9BXB1 951 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 ASPNQ9BXN1 380 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 IFT22Q9H7X7 185 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 PRR13Q9NZ81 148 aa5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 CGGBP1Q9UFW8 167 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC13-208ENST00000505553 SUV39H1O43463 412 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 SCGB1D2O95969 90 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 ETV3P41162 512 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 RAB27AP51159 221 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 GFRA1P56159 465 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 RHBDL3P58872 404 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 OS9Q13438 667 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 HDAC1Q13547 482 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 SART3Q15020 963 aaKnown RBP5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 SPATS1Q496A3 300 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 GTF2IRD2BQ6EKJ0 949 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 FGD2Q7Z6J4 655 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 THAP5Q7Z6K1 395 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 GTF2IRD2Q86UP8 949 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 ZBTB46Q86UZ6 589 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 KIF18BQ86Y91 864 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 XAGE3Q8WTP9 111 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 PPP1R13LQ8WUF5 828 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 CHMP4CQ96CF2 233 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 WNK4Q96J92 1243 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 CAMKK2Q96RR4 588 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 MTFR1LQ9H019 292 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 NKX2-4Q9H2Z4 354 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 AASDHPPTQ9NRN7 309 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 ZIM2Q9NZV7 527 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 SLAMF8Q9P0V8 285 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 APOBEC2Q9Y235 224 aaKnown RBP5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 CAPN6Q9Y6Q1 641 aa5.11□□□□□ -1.59
TRAPPC13-208ENST00000505553 TCRBV16S1A1N1A0A5B0 115 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 GOLGA6CA6NDK9 693 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 GOLGA6BA6NDN3 693 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 SHOXO15266 292 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 AKAP10O43572 662 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 PEX10O60683 326 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 SCG5P05408 212 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 SNRPB2P08579 225 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 GOLGA6DP0CG33 693 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 ATF3P18847 181 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 KIR3DL1P43629 444 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 ZNF445P59923 1031 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 PIN1Q13526 163 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 UBE4AQ14139 1066 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 ZNF460Q14592 562 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 NBPF9Q3BBW0 867 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 CDCA2Q69YH5 1023 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 DDX53Q86TM3 631 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 IRF2BP1Q8IU81 584 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 DNAJB8Q8NHS0 232 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 DCAF4Q8WV16 495 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 RNF141Q8WVD5 230 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 UBE2FQ969M7 185 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 VWCEQ96DN2 955 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 SCLYQ96I15 445 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 RPS6KC1Q96S38 1066 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 SMAD5Q99717 465 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 XYLT2Q9H1B5 865 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 CYP26B1Q9NR63 512 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 GOLGA6AQ9NYA3 693 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 ZSWIM5Q9P217 1185 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 SF3B6Q9Y3B4 125 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 KCTD3Q9Y597 815 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 ST14Q9Y5Y6 855 aa5.1□□□□□ -1.59
TRAPPC13-208ENST00000505553 MYL1P05976 194 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 PYGMP11217 842 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 BPIP17213 487 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 TMPRSS15P98073 1019 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 AMPD2Q01433 879 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms