RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 EPB41L4AQ9HCS5 686 aaPredicted RBP5.62□□□□□ -1.51
LINC01088-202ENST00000505149 MARCH2Q9P0N8 246 aa5.62□□□□□ -1.51
LINC01088-202ENST00000505149 C22orf46C9J442 243 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 BUB1BO60566 1050 aaPredicted RBP5.61□□□□□ -1.51
LINC01088-202ENST00000505149 NTRK1P04629 796 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 MTERF2Q49AM1 385 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 EMC4Q5J8M3 183 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 STYK1Q6J9G0 422 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 NSMFQ6X4W1 530 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 SPATC1Q76KD6 591 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 FAM129CQ86XR2 697 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 MIB1Q86YT6 1006 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 ZBTB38Q8NAP3 1195 aaPredicted RBP5.61□□□□□ -1.51
LINC01088-202ENST00000505149 USP33Q8TEY7 942 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 TMEM169Q96HH4 297 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 AP5M1Q9H0R1 490 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 PPP1R1BQ9UD71 204 aaPredicted RBP5.61□□□□□ -1.51
LINC01088-202ENST00000505149 DBR1Q9UK59 544 aaKnown RBP5.61□□□□□ -1.51
LINC01088-202ENST00000505149 HCFC2Q9Y5Z7 792 aa5.61□□□□□ -1.51
LINC01088-202ENST00000505149 NUAK1O60285 661 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 ASGR2P07307 311 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 BCL6P41182 706 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 CHRNA2Q15822 529 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 NTRK3Q16288 839 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 LCNL1Q6ZST4 164 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 CEP68Q76N32 757 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 B3GNT8Q7Z7M8 397 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 TEX2Q8IWB9 1127 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 PCDH18Q9HCL0 1135 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 SNTG2Q9NY99 539 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 FBXL7Q9UJT9 491 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 ZNF652Q9Y2D9 606 aa5.6□□□□□ -1.51
LINC01088-202ENST00000505149 SGSM2O43147 1006 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 PRODHO43272 600 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 LCP1P13796 627 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 ATF2P15336 505 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 PI3P19957 117 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 FPR2P25090 351 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 HTRA3P83110 453 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 SSRP1Q08945 709 aaKnown RBP5.59□□□□□ -1.51
LINC01088-202ENST00000505149 TCERG1LQ5VWI1 586 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 CYP4F22Q6NT55 531 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 NLGN1Q8N2Q7 840 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC01088-202ENST00000505149 ALG3Q92685 438 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 TRMT2BQ96GJ1 504 aaKnown RBP5.59□□□□□ -1.51
LINC01088-202ENST00000505149 PDGFDQ9GZP0 370 aaPredicted RBP5.59□□□□□ -1.51
LINC01088-202ENST00000505149 RAPGEFL1Q9UHV5 662 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 COA3Q9Y2R0 106 aaPredicted RBP5.59□□□□□ -1.51
LINC01088-202ENST00000505149 PCDHA2Q9Y5H9 948 aa5.59□□□□□ -1.51
LINC01088-202ENST00000505149 TADA3O75528 432 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 ZSCAN22P10073 491 aaPredicted RBP5.58□□□□□ -1.52
LINC01088-202ENST00000505149 PMLP29590 882 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 GPR85P60893 370 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 CACNB2Q08289 660 aaPredicted RBP5.58□□□□□ -1.52
LINC01088-202ENST00000505149 IFRD2Q12894 506 aaPredicted RBP5.58□□□□□ -1.52
LINC01088-202ENST00000505149 KIZQ2M2Z5 673 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 CNKSR3Q6P9H4 555 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 LBX2Q6XYB7 198 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 MAMDC2Q7Z304 686 aaPredicted RBP5.58□□□□□ -1.52
LINC01088-202ENST00000505149 PHF20Q9BVI0 1012 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 EPB41L1Q9H4G0 881 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 PLA2G2DQ9UNK4 145 aa5.58□□□□□ -1.52
LINC01088-202ENST00000505149 FAM221BA6H8Z2 402 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 WNT9AO14904 365 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 DIAPH1O60610 1272 aaKnown RBP5.57□□□□□ -1.52
LINC01088-202ENST00000505149 NCKAP1LP55160 1127 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 SUMO1P63165 101 aaKnown RBP5.57□□□□□ -1.52
LINC01088-202ENST00000505149 FOXO4P98177 505 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 FBLN7Q53RD9 439 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 YOD1Q5VVQ6 348 aaPredicted RBP5.57□□□□□ -1.52
LINC01088-202ENST00000505149 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 PHOSPHO1Q8TCT1 267 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 PANK1Q8TE04 598 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.57□□□□□ -1.52
LINC01088-202ENST00000505149 DRC1Q96MC2 740 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 IRF2BPLQ9H1B7 796 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 NGRNQ9NPE2 291 aaKnown RBP5.57□□□□□ -1.52
LINC01088-202ENST00000505149 HSPBP1Q9NZL4 362 aa5.57□□□□□ -1.52
LINC01088-202ENST00000505149 TRBV23-1A0A0A0MS06 115 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 CCDC163A0A0D9SF12 145 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 HGSO14964 777 aaPredicted RBP5.56□□□□□ -1.52
LINC01088-202ENST00000505149 MSCO60682 206 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 DGKIO75912 1065 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 C6orf222P0C671 652 aaPredicted RBP5.56□□□□□ -1.52
LINC01088-202ENST00000505149 AFF3P51826 1226 aaKnown RBP5.56□□□□□ -1.52
LINC01088-202ENST00000505149 HABP4Q5JVS0 413 aaKnown RBP5.56□□□□□ -1.52
LINC01088-202ENST00000505149 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 ETV3LQ6ZN32 361 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 NPM2Q86SE8 214 aaKnown RBP5.56□□□□□ -1.52
LINC01088-202ENST00000505149 FAM126BQ8IXS8 530 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 IFNL3Q8IZI9 196 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 LINC00482Q8N8I6 264 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 LINC01356Q8N9X3 169 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 UBXN4Q92575 508 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 PTPRN2Q92932 1015 aa5.56□□□□□ -1.52
LINC01088-202ENST00000505149 KISS1RQ969F8 398 aaPredicted RBP5.56□□□□□ -1.52
LINC01088-202ENST00000505149 OSBPL2Q9H1P3 480 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms