RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 KLHDC9Q8NEP7 349 aa19.42■□□□□ 0.7
SYNE4-207ENST00000505054 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.42■□□□□ 0.7
SYNE4-207ENST00000505054 MROH7Q68CQ1 1323 aa19.42■□□□□ 0.7
SYNE4-207ENST00000505054 PRPF3O43395 683 aaKnown RBP19.41■□□□□ 0.7
SYNE4-207ENST00000505054 DUSP11O75319 330 aaKnown RBP19.41■□□□□ 0.7
SYNE4-207ENST00000505054 DNAJB2P25686 324 aa19.41■□□□□ 0.7
SYNE4-207ENST00000505054 ALDH5A1P51649 535 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-207ENST00000505054 RABEP1Q15276 862 aa19.41■□□□□ 0.7
SYNE4-207ENST00000505054 KCNA10Q16322 511 aa19.41■□□□□ 0.7
SYNE4-207ENST00000505054 PKN1Q16512 942 aa19.41■□□□□ 0.7
SYNE4-207ENST00000505054 ME3Q16798 604 aa19.41■□□□□ 0.7
SYNE4-207ENST00000505054 CCSAPQ6IQ19 270 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-207ENST00000505054 TYW1BQ6NUM6 668 aa19.41■□□□□ 0.7
SYNE4-207ENST00000505054 SLKQ9H2G2 1235 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-207ENST00000505054 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-207ENST00000505054 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-207ENST00000505054 STXBP3O00186 592 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 TIMP1P01033 207 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 HOXA13P31271 388 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-207ENST00000505054 PFKFB3Q16875 520 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-207ENST00000505054 NECAB1Q8N987 351 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 MORC4Q8TE76 937 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 GLT1D1Q96MS3 346 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 TAAR1Q96RJ0 339 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 SLC26A6Q9BXS9 759 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 RNF26Q9BY78 433 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-207ENST00000505054 KATNBL1Q9H079 304 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 ADD3Q9UEY8 706 aaKnown RBP19.4■□□□□ 0.7
SYNE4-207ENST00000505054 TBX21Q9UL17 535 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 ELP1O95163 1332 aa19.4■□□□□ 0.7
SYNE4-207ENST00000505054 MYADML2A6NDP7 307 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 ASB14A6NK59 587 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 GCOM1H8Y6P7 765 aaPredicted RBP19.39■□□□□ 0.69
SYNE4-207ENST00000505054 CPLX1O14810 134 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 POLR2MP0CAP2 368 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 SCG2P13521 617 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 ST3GAL1Q11201 340 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 ACVR2BQ13705 512 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 SAMD3Q8N6K7 520 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 PCSK9Q8NBP7 692 aaKnown RBP19.39■□□□□ 0.69
SYNE4-207ENST00000505054 DNERQ8NFT8 737 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 GTF3C6Q969F1 213 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 UPF3AQ9H1J1 476 aaKnown RBP19.39■□□□□ 0.69
SYNE4-207ENST00000505054 ABHD16BQ9H3Z7 469 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 BARHL2Q9NY43 387 aa19.39■□□□□ 0.69
SYNE4-207ENST00000505054 MAP3K20Q9NYL2 800 aaKnown RBP19.39■□□□□ 0.69
SYNE4-207ENST00000505054 LOC102724159A0A0B4J2E5 919 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 hCG_1984214I3L0E3 225 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 CTDNEP1O95476 244 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 C6orf222P0C671 652 aaPredicted RBP19.38■□□□□ 0.69
SYNE4-207ENST00000505054 EDNRBP24530 442 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 PPIGQ13427 754 aaKnown RBP eCLIP19.38■□□□□ 0.696e-8■□□□□ 9.1
SYNE4-207ENST00000505054 PWP2Q15269 919 aaKnown RBP19.38■□□□□ 0.69
SYNE4-207ENST00000505054 MFSD5Q6N075 450 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 PPP1R18Q6NYC8 613 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 ZNF713Q8N859 430 aaPredicted RBP19.38■□□□□ 0.69
SYNE4-207ENST00000505054 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.38■□□□□ 0.697e-6■□□□□ 9.4
SYNE4-207ENST00000505054 SPC25Q9HBM1 224 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
SYNE4-207ENST00000505054 A0A0U1RQG5 324 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-207ENST00000505054 PIK3CDO00329 1044 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 MEIS2O14770 477 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 ADCY6O43306 1168 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 DTNBO60941 627 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 ASGR1P07306 291 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 NAPAP54920 295 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 GJA9P57773 515 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 CPLX2Q6PUV4 134 aaKnown RBP19.37■□□□□ 0.69
SYNE4-207ENST00000505054 USP17L6PQ6QN14 398 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 SYMPKQ92797 1274 aaKnown RBP19.37■□□□□ 0.69
SYNE4-207ENST00000505054 RMDN3Q96TC7 470 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 PSTPIP2Q9H939 334 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 GBF1Q92538 1859 aa19.37■□□□□ 0.69
SYNE4-207ENST00000505054 EIF2AK2P19525 551 aaKnown RBP19.36■□□□□ 0.69
SYNE4-207ENST00000505054 CDK7P50613 346 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 AKAP17AQ02040 695 aaKnown RBP19.36■□□□□ 0.69
SYNE4-207ENST00000505054 SSRP1Q08945 709 aaKnown RBP19.36■□□□□ 0.69
SYNE4-207ENST00000505054 GRIN2CQ14957 1233 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 CCDC144BQ3MJ40 725 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 FCHSD1Q86WN1 690 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 FBXO16Q8IX29 292 aaPredicted RBP19.36■□□□□ 0.69
SYNE4-207ENST00000505054 TRIM22Q8IYM9 498 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 NSUN6Q8TEA1 469 aaKnown RBP19.36■□□□□ 0.69
SYNE4-207ENST00000505054 TIFAQ96CG3 184 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 ZNF576Q9H609 170 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 PXMP2Q9NR77 195 aa19.36■□□□□ 0.69
SYNE4-207ENST00000505054 FRMPD4Q14CM0 1322 aa19.35■□□□□ 0.69
SYNE4-207ENST00000505054 CDKL5O76039 1030 aa19.35■□□□□ 0.69
SYNE4-207ENST00000505054 CD2BP2O95400 341 aaKnown RBP19.35■□□□□ 0.69
SYNE4-207ENST00000505054 UBE2SQ16763 222 aa19.35■□□□□ 0.69
SYNE4-207ENST00000505054 IL31RAQ8NI17 732 aa19.35■□□□□ 0.69
SYNE4-207ENST00000505054 PDCD2LQ9BRP1 358 aa19.35■□□□□ 0.69
SYNE4-207ENST00000505054 STK36Q9NRP7 1315 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 ARVCFO00192 962 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 TLR3O15455 904 aaKnown RBP19.34■□□□□ 0.69
SYNE4-207ENST00000505054 DEXIO95424 95 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 IRX5P78411 483 aaPredicted RBP19.34■□□□□ 0.69
SYNE4-207ENST00000505054 PDE4DQ08499 809 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 ARHGEF16Q5VV41 709 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 PSRC1Q6PGN9 363 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms