RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CYTH3O43739 400 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 B4GALT4O60513 344 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 PARP1P09874 1014 aaKnown RBP15.34■□□□□ 0.05
DDX41-204ENST00000504807 ALADP13716 330 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 ITGA7Q13683 1181 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 ASPRV1Q53RT3 343 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
DDX41-204ENST00000504807 MTMR8Q96EF0 704 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 KCNH6Q9H252 994 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 HIPK3Q9H422 1215 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 SPC25Q9HBM1 224 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
DDX41-204ENST00000504807 ZDBF2Q9HCK1 2354 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 PALM3A6NDB9 673 aaPredicted RBP15.33■□□□□ 0.04
DDX41-204ENST00000504807 PURAQ00577 322 aaKnown RBP15.33■□□□□ 0.04
DDX41-204ENST00000504807 FAM178BQ8IXR5 827 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 MB21D2Q8IYB1 491 aaPredicted RBP15.33■□□□□ 0.04
DDX41-204ENST00000504807 RGS22Q8NE09 1264 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 MAP4K1Q92918 833 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 UBAC1Q9BSL1 405 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 AP5M1Q9H0R1 490 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 WNT8AQ9H1J5 351 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 CNNM2Q9H8M5 875 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 Q9Y3F1 56 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 ABCB11O95342 1321 aa15.33■□□□□ 0.04
DDX41-204ENST00000504807 KLRF2D3W0D1 207 aa15.32■□□□□ 0.04
DDX41-204ENST00000504807 ST18O60284 1047 aa15.32■□□□□ 0.04
DDX41-204ENST00000504807 PDE4DQ08499 809 aa15.32■□□□□ 0.04
DDX41-204ENST00000504807 GRM4Q14833 912 aa15.32■□□□□ 0.04
DDX41-204ENST00000504807 CCDC178Q5BJE1 867 aa15.32■□□□□ 0.04
DDX41-204ENST00000504807 CCDC62Q6P9F0 684 aa15.32■□□□□ 0.04
DDX41-204ENST00000504807 FBXO11Q86XK2 927 aa15.32■□□□□ 0.04
DDX41-204ENST00000504807 LSG1Q9H089 658 aaKnown RBP15.32■□□□□ 0.04
DDX41-204ENST00000504807 TRMT13Q9NUP7 481 aaKnown RBP15.32■□□□□ 0.04
DDX41-204ENST00000504807 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
DDX41-204ENST00000504807 RGS20O76081 388 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 ARHGEF15O94989 841 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 NT5C2P49902 561 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 TROAPQ12815 778 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 GRB10Q13322 594 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 LY6KQ17RY6 165 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 DNERQ8NFT8 737 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 OR6J1Q8NGC5 347 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 IL31RAQ8NI17 732 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 IGDCC4Q8TDY8 1250 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 ZFP91Q96JP5 570 aaPredicted RBP15.31■□□□□ 0.04
DDX41-204ENST00000504807 MYL10Q9BUA6 226 aa15.31■□□□□ 0.04
DDX41-204ENST00000504807 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
DDX41-204ENST00000504807 LOC102724159A0A0B4J2E5 919 aa15.3■□□□□ 0.04
DDX41-204ENST00000504807 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
DDX41-204ENST00000504807 DHX16O60231 1041 aaKnown RBP15.3■□□□□ 0.04
DDX41-204ENST00000504807 MYL3P08590 195 aa15.3■□□□□ 0.04
DDX41-204ENST00000504807 EIF2AK2P19525 551 aaKnown RBP15.3■□□□□ 0.04
DDX41-204ENST00000504807 HSD17B4P51659 736 aa15.3■□□□□ 0.04
DDX41-204ENST00000504807 TTLL4Q14679 1199 aa15.3■□□□□ 0.04
DDX41-204ENST00000504807 PWP2Q15269 919 aaKnown RBP15.3■□□□□ 0.04
DDX41-204ENST00000504807 CTAGE1Q96RT6 745 aa15.3■□□□□ 0.04
DDX41-204ENST00000504807 PIGSQ96S52 555 aa15.3■□□□□ 0.04
DDX41-204ENST00000504807 NOC4LQ9BVI4 516 aaKnown RBP15.3■□□□□ 0.04
DDX41-204ENST00000504807 ALDH8A1Q9H2A2 487 aaPredicted RBP15.3■□□□□ 0.04
DDX41-204ENST00000504807 BRWD1Q9NSI6 2320 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 A6NJR5 290 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 DCXO43602 365 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 CABYRO75952 493 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
DDX41-204ENST00000504807 CYP2C9P11712 490 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 IL9P15248 144 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 HOXA13P31271 388 aaPredicted RBP15.29■□□□□ 0.04
DDX41-204ENST00000504807 GHRHRQ02643 423 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 TAP1Q03518 808 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 ARHGAP1Q07960 439 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 PPP2R5BQ15173 497 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 HFE2Q6ZVN8 426 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 SPRED2Q7Z698 418 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 RPUSD2Q8IZ73 545 aaKnown RBP15.29■□□□□ 0.04
DDX41-204ENST00000504807 SCFD2Q8WU76 684 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
DDX41-204ENST00000504807 SCLYQ96I15 445 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 ESYT1Q9BSJ8 1104 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 RIOX1Q9H6W3 641 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 LY9Q9HBG7 655 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 SCN10AQ9Y5Y9 1956 aa15.29■□□□□ 0.04
DDX41-204ENST00000504807 MYH6P13533 1939 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 ZBTB5O15062 677 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 LPXNO60711 386 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 CFBP00751 764 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 FOXK2Q01167 660 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 NBPF20Q3BBV1 942 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 SEPT14Q6ZU15 432 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 HOMER1Q86YM7 354 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 AFG1LQ8WV93 481 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 PIBF1Q8WXW3 757 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 KAT2BQ92831 832 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 RMDN3Q96TC7 470 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 BCAS3Q9H6U6 928 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 UBE2ZQ9H832 354 aaPredicted RBP15.28■□□□□ 0.04
DDX41-204ENST00000504807 PXMP2Q9NR77 195 aa15.28■□□□□ 0.04
DDX41-204ENST00000504807 PNMA2Q9UL42 364 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms