RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 RAB11FIP4Q86YS3 637 aa29.29■■■□□ 2.28
PVT1-201ENST00000504719 B4GALT4O60513 344 aa29.28■■■□□ 2.28
PVT1-201ENST00000504719 FCHSD1Q86WN1 690 aa29.28■■■□□ 2.28
PVT1-201ENST00000504719 CMTR1Q8N1G2 835 aaKnown RBP29.28■■■□□ 2.28
PVT1-201ENST00000504719 FANCBQ8NB91 859 aa29.28■■■□□ 2.28
PVT1-201ENST00000504719 KCNB2Q92953 911 aa29.28■■■□□ 2.28
PVT1-201ENST00000504719 PPP1R12CQ9BZL4 782 aa29.28■■■□□ 2.28
PVT1-201ENST00000504719 TRPV6Q9H1D0 765 aa29.28■■■□□ 2.28
PVT1-201ENST00000504719 ALDH8A1Q9H2A2 487 aaPredicted RBP29.28■■■□□ 2.28
PVT1-201ENST00000504719 SEC63Q9UGP8 760 aaKnown RBP29.28■■■□□ 2.28
PVT1-201ENST00000504719 RGS20O76081 388 aa29.27■■■□□ 2.28
PVT1-201ENST00000504719 IL31RAQ8NI17 732 aa29.27■■■□□ 2.28
PVT1-201ENST00000504719 AFG1LQ8WV93 481 aa29.27■■■□□ 2.28
PVT1-201ENST00000504719 TCEANC2Q96MN5 208 aa29.27■■■□□ 2.28
PVT1-201ENST00000504719 MRVI1Q9Y6F6 885 aa29.27■■■□□ 2.28
PVT1-201ENST00000504719 EPB41L2O43491 1005 aaKnown RBP29.26■■■□□ 2.27
PVT1-201ENST00000504719 MMP3P08254 477 aa29.26■■■□□ 2.27
PVT1-201ENST00000504719 PPIGQ13427 754 aaKnown RBP eCLIP29.26■■■□□ 2.273e-7■■□□□ 14.2
PVT1-201ENST00000504719 SYNE3Q6ZMZ3 975 aa29.26■■■□□ 2.27
PVT1-201ENST00000504719 TMTC3Q6ZXV5 915 aa29.26■■■□□ 2.27
PVT1-201ENST00000504719 MICU3Q86XE3 530 aa29.26■■■□□ 2.27
PVT1-201ENST00000504719 TMEM199Q8N511 208 aa29.26■■■□□ 2.27
PVT1-201ENST00000504719 SNX14Q9Y5W7 946 aa29.26■■■□□ 2.27
PVT1-201ENST00000504719 CCND2P30279 289 aa29.25■■■□□ 2.27
PVT1-201ENST00000504719 NBPF20Q3BBV1 942 aa29.25■■■□□ 2.27
PVT1-201ENST00000504719 DEFB123Q8N688 67 aa29.25■■■□□ 2.27
PVT1-201ENST00000504719 EMID1Q96A84 441 aaPredicted RBP29.25■■■□□ 2.27
PVT1-201ENST00000504719 USP26Q9BXU7 913 aa29.25■■■□□ 2.27
PVT1-201ENST00000504719 HIPK3Q9H422 1215 aa29.25■■■□□ 2.27
PVT1-201ENST00000504719 FRMPD4Q14CM0 1322 aa29.24■■■□□ 2.27
PVT1-201ENST00000504719 CYP2C18P33260 490 aa29.24■■■□□ 2.27
PVT1-201ENST00000504719 KCNV1Q6PIU1 500 aa29.24■■■□□ 2.27
PVT1-201ENST00000504719 APOA5Q6Q788 366 aa29.24■■■□□ 2.27
PVT1-201ENST00000504719 Q7L0L9 218 aa29.24■■■□□ 2.27
PVT1-201ENST00000504719 RNPC3Q96LT9 517 aaKnown RBP29.24■■■□□ 2.27
PVT1-201ENST00000504719 HMGB1P09429 215 aaKnown RBP29.23■■■□□ 2.27
PVT1-201ENST00000504719 CSF2RAP15509 400 aa29.23■■■□□ 2.27
PVT1-201ENST00000504719 LAMC2Q13753 1193 aa29.23■■■□□ 2.27
PVT1-201ENST00000504719 NFRKBQ6P4R8 1299 aa29.23■■■□□ 2.27
PVT1-201ENST00000504719 CCDC82Q8N4S0 544 aa29.23■■■□□ 2.27
PVT1-201ENST00000504719 NOC4LQ9BVI4 516 aaKnown RBP29.23■■■□□ 2.27
PVT1-201ENST00000504719 TRMT13Q9NUP7 481 aaKnown RBP29.23■■■□□ 2.27
PVT1-201ENST00000504719 BRPF3Q9ULD4 1205 aa29.23■■■□□ 2.27
PVT1-201ENST00000504719 UMODL1Q5DID0 1318 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 PIK3CDO00329 1044 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 MEIS2O14770 477 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 SUPT20HL2P0C7V6 817 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 USP17L6PQ6QN14 398 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 C16orf59Q7L2K0 433 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 SMARCC2Q8TAQ2 1214 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 CUL5Q93034 780 aa29.22■■■□□ 2.27
PVT1-201ENST00000504719 ZFP91Q96JP5 570 aaPredicted RBP29.22■■■□□ 2.27
PVT1-201ENST00000504719 JAKMIP1Q96N16 626 aaKnown RBP29.22■■■□□ 2.27
PVT1-201ENST00000504719 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.22■■■□□ 2.271e-10■□□□□ 10.1
PVT1-201ENST00000504719 RBM28Q9NW13 759 aaKnown RBP29.22■■■□□ 2.27
PVT1-201ENST00000504719 TGFB3P10600 412 aa29.21■■■□□ 2.27
PVT1-201ENST00000504719 CASTP20810 708 aaKnown RBP29.21■■■□□ 2.27
PVT1-201ENST00000504719 PTPN11Q06124 597 aaPredicted RBP29.21■■■□□ 2.27
PVT1-201ENST00000504719 FAM47CQ5HY64 1035 aa29.21■■■□□ 2.27
PVT1-201ENST00000504719 FAM109BQ6ICB4 259 aaPredicted RBP29.21■■■□□ 2.27
PVT1-201ENST00000504719 DHX37Q8IY37 1157 aaKnown RBP29.21■■■□□ 2.27
PVT1-201ENST00000504719 PPP1R13LQ8WUF5 828 aa29.21■■■□□ 2.27
PVT1-201ENST00000504719 LAMA2P24043 3122 aaKnown RBP29.2■■■□□ 2.27
PVT1-201ENST00000504719 hCG_1642624A0A1W2PR95 340 aa29.2■■■□□ 2.26
PVT1-201ENST00000504719 MRPS9P82933 396 aaKnown RBP29.2■■■□□ 2.26
PVT1-201ENST00000504719 SMAD3P84022 425 aaKnown RBP29.2■■■□□ 2.26
PVT1-201ENST00000504719 DGKDQ16760 1214 aa29.2■■■□□ 2.26
PVT1-201ENST00000504719 TMEM240Q5SV17 173 aa29.2■■■□□ 2.26
PVT1-201ENST00000504719 PPTC7Q8NI37 304 aa29.2■■■□□ 2.26
PVT1-201ENST00000504719 KAT2BQ92831 832 aa29.2■■■□□ 2.26
PVT1-201ENST00000504719 ZBTB43O43298 467 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 STAM2O75886 525 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 CPA1P15085 419 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 SP2Q02086 613 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 CELF3Q5SZQ8 465 aaKnown RBP29.19■■■□□ 2.26
PVT1-201ENST00000504719 MYSM1Q5VVJ2 828 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 GPKOWQ92917 476 aaPredicted RBP eCLIP29.19■■■□□ 2.26
PVT1-201ENST00000504719 IL23AQ9NPF7 189 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 MTMR10Q9NXD2 777 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 CNTNAP5Q8WYK1 1306 aa29.19■■■□□ 2.26
PVT1-201ENST00000504719 ACRP10323 421 aa29.18■■■□□ 2.26
PVT1-201ENST00000504719 CYP2C9P11712 490 aa29.18■■■□□ 2.26
PVT1-201ENST00000504719 CCL23P55773 120 aa29.18■■■□□ 2.26
PVT1-201ENST00000504719 RTN1Q16799 776 aa29.18■■■□□ 2.26
PVT1-201ENST00000504719 WNT8AQ9H1J5 351 aa29.18■■■□□ 2.26
PVT1-201ENST00000504719 PSTPIP2Q9H939 334 aa29.18■■■□□ 2.26
PVT1-201ENST00000504719 KLF18A0A0U1RQI7 1052 aa29.17■■■□□ 2.26
PVT1-201ENST00000504719 GGPS1O95749 300 aa29.17■■■□□ 2.26
PVT1-201ENST00000504719 UBA1P22314 1058 aaKnown RBP29.17■■■□□ 2.26
PVT1-201ENST00000504719 ICAM3P32942 547 aa29.17■■■□□ 2.26
PVT1-201ENST00000504719 FUT2Q10981 343 aa29.17■■■□□ 2.26
PVT1-201ENST00000504719 PSRC1Q6PGN9 363 aaPredicted RBP29.17■■■□□ 2.26
PVT1-201ENST00000504719 BLOC1S2Q6QNY1 142 aa29.17■■■□□ 2.26
PVT1-201ENST00000504719 ZNF365Q70YC5 407 aa29.17■■■□□ 2.26
PVT1-201ENST00000504719 INPP4AQ96PE3 977 aaPredicted RBP29.17■■■□□ 2.26
PVT1-201ENST00000504719 HOXD8P13378 290 aaPredicted RBP29.16■■■□□ 2.26
PVT1-201ENST00000504719 PSMA5P28066 241 aa29.16■■■□□ 2.26
PVT1-201ENST00000504719 RCAN1P53805 252 aa29.16■■■□□ 2.26
PVT1-201ENST00000504719 GNPTABQ3T906 1256 aa29.16■■■□□ 2.26
PVT1-201ENST00000504719 SESTD1Q86VW0 696 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms